G1796578


Basic Information

Item Value
gene id G1796578
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28815596 ~ 28815851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056032
attgattgattgattgttttttacaagataagtttaatgctagctagcaacttaccttggcttcttactgcattcacgtaataGACAGTCTCCTCGTAGAGTACAATGTAAGGTGGTtaaagcattggactagttaactgcaagactgaatccccgagctgacaaggtaaaaatctgtcgttctgcccctgaacaaggcagttaacccactgttcccaggctgtcattgaaaataagaatgtgttcttaactgact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056032 True 256 lncRNA 0.40 1 28815596 28815851

Neighbor

gene id symbol gene type direction distance location
LOC110501697 LOC106582162 coding upstream 112932 28701867 ~ 28702664 (+)
LOC110502084 NA coding upstream 419246 28236220 ~ 28400108 (+)
trnaa-ugc-174 NA coding upstream 525299 28290225 ~ 28290297 (+)
LOC110501694 LOC106582055 coding upstream 739025 28072420 ~ 28076571 (+)
LOC110501693 LOC106582057 coding upstream 763577 28036917 ~ 28052019 (+)
LOC110502085 LOC106582160 coding downstream 164367 28977890 ~ 28984226 (+)
LOC110502121 cld14 coding downstream 177482 28993333 ~ 28994549 (+)
LOC110501700 LOC106582186 coding downstream 181912 28997763 ~ 29010281 (+)
LOC110501701 LOC106586531 coding downstream 247788 29063639 ~ 29094498 (+)
LOC110501702 LOC106582183 coding downstream 286262 29102113 ~ 29167753 (+)
G1796574 NA non-coding upstream 11469 28803780 ~ 28804127 (+)
G1796573 NA non-coding upstream 13581 28801790 ~ 28802015 (+)
G1796567 NA non-coding upstream 23552 28791604 ~ 28792044 (+)
G1796555 NA non-coding upstream 49887 28760734 ~ 28765709 (+)
G1796537 NA non-coding upstream 65610 28749784 ~ 28749986 (+)
G1796615 NA non-coding downstream 47836 28863687 ~ 28864346 (+)
G1796616 NA non-coding downstream 49162 28865013 ~ 28865248 (+)
G1796619 NA non-coding downstream 55736 28871587 ~ 28871862 (+)
G1796627 NA non-coding downstream 65665 28881516 ~ 28881791 (+)
G1796634 NA non-coding downstream 77361 28893212 ~ 28893800 (+)
G1795550 NA other upstream 723480 28091565 ~ 28092116 (+)
G1795411 NA other upstream 902721 27898367 ~ 27912875 (+)
G1793717 NA other upstream 2499353 26315826 ~ 26316243 (+)
G1793045 NA other upstream 3083842 25731326 ~ 25731754 (+)
G1797582 NA other downstream 928341 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 1107706 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1684805 30500656 ~ 30545954 (+)

Expression


Co-expression Network