G1796761


Basic Information

Item Value
gene id G1796761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28935316 ~ 28941305 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056246
TAGATTCTACTCAGGAAGGAATATGAGAGAGATCACCTtttggaggacacacacacaccaatctctGATCTCTTCCTTCACTTATATTTGTTTATGATGCGTTCTGAGTTGCTCTGGAGAGCTGAGAGAGTAAATTACCTTTATTCATACAGGATGTAAGTTCCAGTGGGACCTTAAGTAATCATTAAGACCGTTCTgagagtgtgtggtgtgtgtgtacagcatatagtgtgttagtgtgtgagtCTCCCTTATGCAAGATCACCTCCCACCAGTCTTATAAACCCAACCAAACCTGACATCTCGGGAGCCTCTGACCTCATTGACAACTGAGCTCAACACCACTGCATAGTGGGTAGTCTGTAGACAGTGTTGGACATGTGGCGTAAACACAGACACCCTGTGTAagagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaatgtgtctgtaaactaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaactgtaaagtgtctgtagactgtaactgtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctatagattaacagtaaagtgtctgtagactataacagtaaagtgtctgtagactaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagcgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtatgtagactgtaacagtaaagtgtatGTAGACTAACAGTACAGTGTCTATAGACTAACAGTAAAGTGTatgtagactgtaacagtaaagtgtctgtaggctgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctataGACTGTAAAAGTAAagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaaagtgtctgtagactataacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactataacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtatgtagactgtaacagtaaagtgtatGTAGACTAACAGTACAGTGTCTATAGACTAACAGTAAAGTGTatgtagactgtaacagtaaagtgtctgtaggctgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtaggctgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctatagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaaagtgtctgtagactataacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtttgtagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactatAACAGTAAAGCGTctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtatgtagactgtaacagtaaagtgtatgtagactaacagtacagtatctatagactgtaacagtaaagtgtatgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctatagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggTAATAGTAAagtgactgtaacagtaaagtgtctataGACTGTAACAgcaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaaaagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaaagtgtctgtagactataacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtttgtagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactatAACAGTAAAGCGTctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgactgtaacagtaaagtgactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactgtaacagtaaagtgtctgtagactgtaacagtaaagtgtctatagactaacagtaaagtgtctgtagactgtaacagtaaagtgtctgtagacggtaacagtaaagtgactgtaacagtaaagtgtctgtagactaacagtaaagtgtc

Function

NR:

description
Neurofilament heavy polypeptide, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056246 True 4113 lncRNA 0.37 3 28935316 28941305

Neighbor

gene id symbol gene type direction distance location
LOC110501699 NA coding downstream 108608 28819330 ~ 28826708 (-)
trnan-guu-200 NA coding downstream 215184 28720059 ~ 28720298 (-)
LOC110501696 LOC106582163 coding downstream 386751 28538705 ~ 28548565 (-)
LOC110502083 LOC101162407 coding downstream 872633 28058893 ~ 28062683 (-)
LOC110501691 LOC106582059 coding downstream 916200 28009421 ~ 28019116 (-)
LOC118943585 NA coding upstream 382840 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 492247 29433552 ~ 29441071 (-)
dnajc15 dcj15 coding upstream 664758 29606063 ~ 29619908 (-)
tnfsf11 LOC106582173 coding upstream 765507 29706812 ~ 29727741 (-)
LOC110501713 LOC106582171 coding upstream 804064 29745369 ~ 29770850 (-)
G1796758 NA non-coding downstream 48172 28886912 ~ 28887144 (-)
G1796743 NA non-coding downstream 62511 28872595 ~ 28872805 (-)
G1796741 NA non-coding downstream 63398 28871584 ~ 28871918 (-)
G1796739 NA non-coding downstream 70108 28864999 ~ 28865208 (-)
G1796738 NA non-coding downstream 70768 28864119 ~ 28864548 (-)
G1796793 NA non-coding upstream 12110 28953415 ~ 28957799 (-)
G1796820 NA non-coding upstream 57242 28998547 ~ 28998857 (-)
G1796822 NA non-coding upstream 59686 29000991 ~ 29001282 (-)
G1796824 LOC106582186 non-coding upstream 60826 29002131 ~ 29002541 (-)
G1796827 LOC106582186 non-coding upstream 62630 29003935 ~ 29004148 (-)
G1796401 NA other downstream 308425 28626138 ~ 28626891 (-)
G1796239 NA other downstream 496545 28434915 ~ 28451815 (-)
G1796204 NA other downstream 600695 28334224 ~ 28334621 (-)
G1797146 LOC106582182 other upstream 270359 29211664 ~ 29243649 (-)
G1797556 NA other upstream 718162 29659467 ~ 29660947 (-)
LOC110501714 LOC106582170 other upstream 896972 29835498 ~ 29846456 (-)
G1797936 NA other upstream 1030253 29971558 ~ 29978535 (-)
G1798732 LOC106582226 other upstream 1129770 30071075 ~ 30071764 (-)

Expression


Co-expression Network