Gene
RNA
| Item | Value |
|---|---|
| gene id | G1796820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 28998547 ~ 28998857 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: high-affinity choline transporter 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2056319 | True | 311 | lncRNA | 0.56 | 1 | 28998547 | 28998857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501699 | NA | coding | downstream | 171839 | 28819330 ~ 28826708 (-) |
| trnan-guu-200 | NA | coding | downstream | 278415 | 28720059 ~ 28720298 (-) |
| LOC110501696 | LOC106582163 | coding | downstream | 449982 | 28538705 ~ 28548565 (-) |
| LOC110502083 | LOC101162407 | coding | downstream | 935864 | 28058893 ~ 28062683 (-) |
| LOC110501691 | LOC106582059 | coding | downstream | 979431 | 28009421 ~ 28019116 (-) |
| LOC118943585 | NA | coding | upstream | 325288 | 29324145 ~ 29325269 (-) |
| LOC110501708 | LOC106582177 | coding | upstream | 434695 | 29433552 ~ 29441071 (-) |
| dnajc15 | dcj15 | coding | upstream | 607206 | 29606063 ~ 29619908 (-) |
| tnfsf11 | LOC106582173 | coding | upstream | 707955 | 29706812 ~ 29727741 (-) |
| LOC110501713 | LOC106582171 | coding | upstream | 746512 | 29745369 ~ 29770850 (-) |
| G1796793 | NA | non-coding | downstream | 40748 | 28953415 ~ 28957799 (-) |
| G1796761 | NA | non-coding | downstream | 57242 | 28935316 ~ 28941305 (-) |
| G1796758 | NA | non-coding | downstream | 111403 | 28886912 ~ 28887144 (-) |
| G1796743 | NA | non-coding | downstream | 125742 | 28872595 ~ 28872805 (-) |
| G1796741 | NA | non-coding | downstream | 126629 | 28871584 ~ 28871918 (-) |
| G1796822 | NA | non-coding | upstream | 2134 | 29000991 ~ 29001282 (-) |
| G1796824 | LOC106582186 | non-coding | upstream | 3274 | 29002131 ~ 29002541 (-) |
| G1796827 | LOC106582186 | non-coding | upstream | 5078 | 29003935 ~ 29004148 (-) |
| G1796828 | LOC106582186 | non-coding | upstream | 7007 | 29005864 ~ 29010248 (-) |
| G1796847 | NA | non-coding | upstream | 32543 | 29031400 ~ 29031618 (-) |
| G1796401 | NA | other | downstream | 371656 | 28626138 ~ 28626891 (-) |
| G1796239 | NA | other | downstream | 559776 | 28434915 ~ 28451815 (-) |
| G1796204 | NA | other | downstream | 663926 | 28334224 ~ 28334621 (-) |
| G1797146 | LOC106582182 | other | upstream | 212807 | 29211664 ~ 29243649 (-) |
| G1797556 | NA | other | upstream | 660610 | 29659467 ~ 29660947 (-) |
| LOC110501714 | LOC106582170 | other | upstream | 839420 | 29835498 ~ 29846456 (-) |
| G1797936 | NA | other | upstream | 972701 | 29971558 ~ 29978535 (-) |
| G1798732 | LOC106582226 | other | upstream | 1072218 | 30071075 ~ 30071764 (-) |
