Gene
RNA
| Item | Value |
|---|---|
| gene id | G1796827 |
| gene name | LOC106582186 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 29003935 ~ 29004148 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| high-affinity choline transporter 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2056326 | True | 214 | lncRNA | 0.55 | 1 | 29003935 | 29004148 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501699 | NA | coding | downstream | 177227 | 28819330 ~ 28826708 (-) |
| trnan-guu-200 | NA | coding | downstream | 283803 | 28720059 ~ 28720298 (-) |
| LOC110501696 | LOC106582163 | coding | downstream | 455370 | 28538705 ~ 28548565 (-) |
| LOC110502083 | LOC101162407 | coding | downstream | 941252 | 28058893 ~ 28062683 (-) |
| LOC110501691 | LOC106582059 | coding | downstream | 984819 | 28009421 ~ 28019116 (-) |
| LOC118943585 | NA | coding | upstream | 319997 | 29324145 ~ 29325269 (-) |
| LOC110501708 | LOC106582177 | coding | upstream | 429404 | 29433552 ~ 29441071 (-) |
| dnajc15 | dcj15 | coding | upstream | 601915 | 29606063 ~ 29619908 (-) |
| tnfsf11 | LOC106582173 | coding | upstream | 702664 | 29706812 ~ 29727741 (-) |
| LOC110501713 | LOC106582171 | coding | upstream | 741221 | 29745369 ~ 29770850 (-) |
| G1796824 | LOC106582186 | non-coding | downstream | 1394 | 29002131 ~ 29002541 (-) |
| G1796822 | NA | non-coding | downstream | 2653 | 29000991 ~ 29001282 (-) |
| G1796820 | NA | non-coding | downstream | 5078 | 28998547 ~ 28998857 (-) |
| G1796793 | NA | non-coding | downstream | 46136 | 28953415 ~ 28957799 (-) |
| G1796761 | NA | non-coding | downstream | 62630 | 28935316 ~ 28941305 (-) |
| G1796828 | LOC106582186 | non-coding | upstream | 1716 | 29005864 ~ 29010248 (-) |
| G1796847 | NA | non-coding | upstream | 27252 | 29031400 ~ 29031618 (-) |
| G1796859 | NA | non-coding | upstream | 36992 | 29041140 ~ 29041351 (-) |
| G1797056 | LOC106582185 | non-coding | upstream | 65467 | 29069615 ~ 29072660 (-) |
| G1797070 | NA | non-coding | upstream | 85085 | 29089233 ~ 29089646 (-) |
| G1796401 | NA | other | downstream | 377044 | 28626138 ~ 28626891 (-) |
| G1796239 | NA | other | downstream | 565164 | 28434915 ~ 28451815 (-) |
| G1796204 | NA | other | downstream | 669314 | 28334224 ~ 28334621 (-) |
| G1797146 | LOC106582182 | other | upstream | 207516 | 29211664 ~ 29243649 (-) |
| G1797556 | NA | other | upstream | 655319 | 29659467 ~ 29660947 (-) |
| LOC110501714 | LOC106582170 | other | upstream | 834129 | 29835498 ~ 29846456 (-) |
| G1797936 | NA | other | upstream | 967410 | 29971558 ~ 29978535 (-) |
| G1798732 | LOC106582226 | other | upstream | 1066927 | 30071075 ~ 30071764 (-) |
