G1797116


Basic Information

Item Value
gene id G1797116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29158076 ~ 29159430 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056660
ttcaactgtacatgctgaAATGCATCTGCAGTGCTGCTTAATAAGTTGGTCAAACTAAACAAGAATTTAAACTCCTCATCCCGACAGCATCATTGCATCAATGCAGCGTAATACATTCTGTCGTCAAACTTGTTTCATTAATACAAAATTGTTACTGGATATAtatgtgcaacaaaagttcaacattcaccttttgGTACAAATTCTGTCAAGTCTAGCATACAATTTGATGCATACATTGGATAAATCCAacatatgcaccacacagaaAGTACTGTGCTGCATCTGCAAGGCAATGTTGCAAGGCAAACACAGTGTTACATTGGATATTAATGTACATTTTAATGTACTTCTGTTGTACCAAAACACAAAAATGCTGTTGGTCAGATCGAGGTGTTACACCTTGATCACACAGCACCGATAGTGTCTTTGCTCAAAATAGTAAGCAGCATCATCTgtatatgtgtgcaacaaaagttcaacattcactttgctaccatttctgtcaagcagTCTAATCATACAGTTTCACACATACGTTCGATAAATCCAAGGTACACCGAAGGCACTGCAACTTTAATAATACTGTCGATGTGATCAAGGCACAAGGCTACTATATTCCTAATAAAAACACGGACTACGCTATTGCGCGACACTGCATACAAGCCAACCATGGCTCACCTTCCTCCCTGTGCTCTGTAACCATAGAACACTTCCACATTTCACCAAGAGGAGGTGACATTGTACGTAAACTAAAACAGAGGCATTCTGGCAGTTCTCAGACACTGTGGATCCTAAGGATCTAAGATGATTTTTGTCATCGTTTGTCATCGTTTCTATAATGTTGTTGCCTTGATTTGTTGGGGTCTCTGTGACTCTGGATTCACAGACACCCAAATATCATCTACATTGAACTGACCTATTGATTAGCGACCCACACTATGTCTGTTattatcaaatcaaactgtattagtcacatacgccgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagggagaccttacagtgaaatgctgaatacaacaggtgtagggagaccttacagtgaaatgctgaatacaacaggtgtaggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056660 True 1199 lncRNA 0.40 2 29158076 29159430

Neighbor

gene id symbol gene type direction distance location
LOC110501699 NA coding downstream 331368 28819330 ~ 28826708 (-)
trnan-guu-200 NA coding downstream 437944 28720059 ~ 28720298 (-)
LOC110501696 LOC106582163 coding downstream 609511 28538705 ~ 28548565 (-)
LOC110502083 LOC101162407 coding downstream 1095393 28058893 ~ 28062683 (-)
LOC110501691 LOC106582059 coding downstream 1138960 28009421 ~ 28019116 (-)
LOC118943585 NA coding upstream 164715 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 274122 29433552 ~ 29441071 (-)
dnajc15 dcj15 coding upstream 446633 29606063 ~ 29619908 (-)
tnfsf11 LOC106582173 coding upstream 547382 29706812 ~ 29727741 (-)
LOC110501713 LOC106582171 coding upstream 585939 29745369 ~ 29770850 (-)
G1797070 NA non-coding downstream 68430 29089233 ~ 29089646 (-)
G1797056 LOC106582185 non-coding downstream 85416 29069615 ~ 29072660 (-)
G1796859 NA non-coding downstream 116725 29041140 ~ 29041351 (-)
G1796847 NA non-coding downstream 126458 29031400 ~ 29031618 (-)
G1796828 LOC106582186 non-coding downstream 147828 29005864 ~ 29010248 (-)
G1797140 LOC106582182 non-coding upstream 35746 29195176 ~ 29195617 (-)
G1797163 NA non-coding upstream 84525 29243955 ~ 29244346 (-)
G1797164 NA non-coding upstream 85309 29244739 ~ 29244944 (-)
G1797168 NA non-coding upstream 90336 29249766 ~ 29250214 (-)
G1797179 NA non-coding upstream 109934 29269364 ~ 29269662 (-)
G1796401 NA other downstream 531185 28626138 ~ 28626891 (-)
G1796239 NA other downstream 719305 28434915 ~ 28451815 (-)
G1796204 NA other downstream 823455 28334224 ~ 28334621 (-)
G1797146 LOC106582182 other upstream 52234 29211664 ~ 29243649 (-)
G1797556 NA other upstream 500037 29659467 ~ 29660947 (-)
LOC110501714 LOC106582170 other upstream 678847 29835498 ~ 29846456 (-)
G1797936 NA other upstream 812128 29971558 ~ 29978535 (-)
G1798732 LOC106582226 other upstream 911645 30071075 ~ 30071764 (-)

Expression


Co-expression Network