Gene
RNA
| Item | Value |
|---|---|
| gene id | G1797140 |
| gene name | LOC106582182 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 29195176 ~ 29195617 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| E3 SUMO-protein ligase RanBP2-like isoform X4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2056686 | True | 303 | lncRNA | 0.55 | 2 | 29195176 | 29195617 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501699 | NA | coding | downstream | 368468 | 28819330 ~ 28826708 (-) |
| trnan-guu-200 | NA | coding | downstream | 475044 | 28720059 ~ 28720298 (-) |
| LOC110501696 | LOC106582163 | coding | downstream | 646611 | 28538705 ~ 28548565 (-) |
| LOC110502083 | LOC101162407 | coding | downstream | 1132493 | 28058893 ~ 28062683 (-) |
| LOC110501691 | LOC106582059 | coding | downstream | 1176060 | 28009421 ~ 28019116 (-) |
| LOC118943585 | NA | coding | upstream | 128528 | 29324145 ~ 29325269 (-) |
| LOC110501708 | LOC106582177 | coding | upstream | 237935 | 29433552 ~ 29441071 (-) |
| dnajc15 | dcj15 | coding | upstream | 410446 | 29606063 ~ 29619908 (-) |
| tnfsf11 | LOC106582173 | coding | upstream | 511195 | 29706812 ~ 29727741 (-) |
| LOC110501713 | LOC106582171 | coding | upstream | 549752 | 29745369 ~ 29770850 (-) |
| G1797116 | NA | non-coding | downstream | 35746 | 29158076 ~ 29159430 (-) |
| G1797070 | NA | non-coding | downstream | 105530 | 29089233 ~ 29089646 (-) |
| G1797056 | LOC106582185 | non-coding | downstream | 122516 | 29069615 ~ 29072660 (-) |
| G1796859 | NA | non-coding | downstream | 153825 | 29041140 ~ 29041351 (-) |
| G1796847 | NA | non-coding | downstream | 163558 | 29031400 ~ 29031618 (-) |
| G1797163 | NA | non-coding | upstream | 48338 | 29243955 ~ 29244346 (-) |
| G1797164 | NA | non-coding | upstream | 49122 | 29244739 ~ 29244944 (-) |
| G1797168 | NA | non-coding | upstream | 54149 | 29249766 ~ 29250214 (-) |
| G1797179 | NA | non-coding | upstream | 73747 | 29269364 ~ 29269662 (-) |
| G1797188 | NA | non-coding | upstream | 97280 | 29292897 ~ 29293244 (-) |
| G1796401 | NA | other | downstream | 568285 | 28626138 ~ 28626891 (-) |
| G1796239 | NA | other | downstream | 756405 | 28434915 ~ 28451815 (-) |
| G1796204 | NA | other | downstream | 860555 | 28334224 ~ 28334621 (-) |
| G1797146 | LOC106582182 | other | upstream | 16047 | 29211664 ~ 29243649 (-) |
| G1797556 | NA | other | upstream | 463850 | 29659467 ~ 29660947 (-) |
| LOC110501714 | LOC106582170 | other | upstream | 642660 | 29835498 ~ 29846456 (-) |
| G1797936 | NA | other | upstream | 775941 | 29971558 ~ 29978535 (-) |
| G1798732 | LOC106582226 | other | upstream | 875458 | 30071075 ~ 30071764 (-) |
