G1797146 (LOC106582182)


Basic Information

Item Value
gene id G1797146
gene name LOC106582182
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29211664 ~ 29243649 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056693
TCAGTATAAAGCAACTTTATTTCTAAAGACATTCTCCAGCATCATTTATATATTGACCATAAGAATTGTTTCAACTCCAAGTGATATTTGTCAACAGAATACCATAGAAGGTTCTTCCACAACCATAAGATATTATGTCATCCCTCTCCCAAAGTGTCACACAGCAGGTTATAGTTCATCATATTCCTACTTTCGGAGTTTAAGATGAACAAGGTTCGTCTCAATGATTTGTACATTATGAAATAAATGTatacacaaaaacacaccaccacacctaAAAGTATTCAcagggagcaggagagaggaaaaTCGTTCAAATGAACAGAGGTTGGTTCTTAAACAAGGTTTCTTGTTAATCTCAATGAAGGCTTAATTATGCAAAACAATCCAGTTAGGGAGCTTATGAAGGAACCAGTGTTTTCAACTTTTAATAGAACACATGAAAAGAACCCCCCCACCCAAAAAAGAATTGAATGTATACACAAAAATAAAGTCTGGAGATTCACACAGTCACATGCTGCCCTCAGGGTGGGGCAACACTTATGAAAAGGAGACCATCtctgtctcaaatgacaccctatttccccTGTAGTACACTACCAGAACCCTTAGTGCACTCCACATGGGCTCtgcaaaaaaactaaacatgTTTCACATTACATGAGGTATAGGGTCTCATTTGAGATTTTCCTACTATAGTTGTCCACTCCACAGTTTGAAAGCCTATCACTGTCCAGTCCATGGCCAGAGCGAAGGCCGATAGACGTCCAGTCAGTGACCAGATCTCAGCCCTACAGTtgagatgtcaacagtcagtgaCCAGATCTCAGCTCTACAGTtgagatgtcaacagtcagtgaACAGAACGAAGCTCTACAGTTGTCCACATTCGGTGATGACAATCTTCTTGCTGGGTTGGCCAGTCTTGGTGCCCAGCTTTCCCATGCTGCGAACCACATCCATGCCGTCTCTGACGAAGCCAAAGGCCACATGTTTGAAGTCCAAGTGCTCAGCCTTCTTCAAAGTGATGAAGAACTGGGAGTTGTTGGTGTCTCGGCCGTGGTTGGCCATGGACAGCAGCCCCGGGCCTGTGTGGCGCACGTCAAAATTCTCATCCTCAAACTTGTGACCGTAGATGGATTTCCCTCCTGTCCCATCCTGGTTGGTGATGTCTCCACC
>TU2056696
TCAGTATAAAGCAACTTTATTTCTAAAGACATTCTCCAGCATCATTTATATATTGACCATAAGAATTGTTTCAACTCCAAGTGATATTTGTCAACAGAATACCATAGAAGGTTCTTCCACAACCATAAGATATTATGTCATCCCTCTCCCAAAGTGTCACACAGCAGGTTATAGTTCATCATATTCCTACTTTCGGAGTTTAAGATGAACAAGGTTCGTCTCAATGATTTGTACATTATGAAATCAATGTatacacaaaaacacaccaccacacctaAAAGTATTCAcagggagcaggagagaggaaaaTCGTTCAAATGAACAGAGGTTGGTTCTTAAACAAGGTTCGTCTCAATGATTTGTACATTATGAAATAAATGTatacacaaaaacacaccaccacacctaAAAGTATTCAcagggagcaggagagaggaaaaTCGTTCAAATGAACAGAGGTTGGTTCTTAAACAAGGTTTCTTGTTAATCTCAATGAAGGCTTAATTATGCAAAACAATCCAGTTAGGGAGCTTATGAAGGAACCAGTGTTTTCAACTTTTAATAGAACACATGAAAAGAACCCCCCCACCCAAAAAAGAATTGAATGTATACACAAAAATAAAGTCTGGAGATTCACACAGTCACATGCTGCCCTCAGGGTGGGGCAACACTTATGAAAAGGAGACCATCtctgtctcaaatgacaccctatttccccTGTAGTACACTACCAGAACCCTTAGTGCACTCCACATGGGCTCtgcaaaaaaactaaacatgTTTCACATTACATGAGGTATAGGGTCTCATTTGAGATTTTCCTACTATAGTTGTCCACTCCACAGTTTGAAAGCCTATCACTGTCCAGTCCATGGCCAGAGCGAAGGCCGATAGACGTCCAGTCAGTGACCAGATCTCAGCCCTACAGTtgagatgtcaacagtcagtgaCCAGATCTCAGCTCTACAGTtgagatgtcaacagtcagtgaACAGAACGAAGCTCTACAGTTGTCCACATTCGGTGATGACAATCTTCTTGCTGGGTTGGCCAGTCTTGGTGCCCAGCTTTCCCATGCTGCGAACCACATCCATGCCGTCTCTGACGAAGCCAAAGGCCACATGTTTGAAGTCCAAGTGCTCAGCCTTCTTCAAAGTGATGAAGAACTGGGAGTTGTTGGTGTCTCGGCCGTGGTTGGCCATGGACAGCAGCCCCGGGCCTGTGTGGCGCACGTCAAAATTCTCATCCTCAAACTTGTGACCGTAGATGGATTTCCCTCCTGTCCCATCCTGGTTGGTGATGTCTCCACC

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056693 False 1179 TUCP 0.44 2 29211664 29243649
TU2056696 True 1310 TUCP 0.43 2 29211664 29243649

Neighbor

gene id symbol gene type direction distance location
LOC110501699 NA coding downstream 384956 28819330 ~ 28826708 (-)
trnan-guu-200 NA coding downstream 491532 28720059 ~ 28720298 (-)
LOC110501696 LOC106582163 coding downstream 663099 28538705 ~ 28548565 (-)
LOC110502083 LOC101162407 coding downstream 1148981 28058893 ~ 28062683 (-)
LOC110501691 LOC106582059 coding downstream 1192548 28009421 ~ 28019116 (-)
LOC118943585 NA coding upstream 80496 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 189903 29433552 ~ 29441071 (-)
dnajc15 dcj15 coding upstream 362414 29606063 ~ 29619908 (-)
tnfsf11 LOC106582173 coding upstream 463163 29706812 ~ 29727741 (-)
LOC110501713 LOC106582171 coding upstream 501720 29745369 ~ 29770850 (-)
G1797140 LOC106582182 non-coding downstream 16047 29195176 ~ 29195617 (-)
G1797116 NA non-coding downstream 52234 29158076 ~ 29159430 (-)
G1797070 NA non-coding downstream 122018 29089233 ~ 29089646 (-)
G1797056 LOC106582185 non-coding downstream 139004 29069615 ~ 29072660 (-)
G1796859 NA non-coding downstream 170313 29041140 ~ 29041351 (-)
G1797163 NA non-coding upstream 306 29243955 ~ 29244346 (-)
G1797164 NA non-coding upstream 1090 29244739 ~ 29244944 (-)
G1797168 NA non-coding upstream 6117 29249766 ~ 29250214 (-)
G1797179 NA non-coding upstream 25715 29269364 ~ 29269662 (-)
G1797188 NA non-coding upstream 49248 29292897 ~ 29293244 (-)
G1796401 NA other downstream 584773 28626138 ~ 28626891 (-)
G1796239 NA other downstream 772893 28434915 ~ 28451815 (-)
G1796204 NA other downstream 877043 28334224 ~ 28334621 (-)
G1797556 NA other upstream 415818 29659467 ~ 29660947 (-)
LOC110501714 LOC106582170 other upstream 594628 29835498 ~ 29846456 (-)
G1797936 NA other upstream 727909 29971558 ~ 29978535 (-)
G1798732 LOC106582226 other upstream 827426 30071075 ~ 30071764 (-)
G1798781 NA other upstream 916585 30160234 ~ 30160686 (-)

Expression


Co-expression Network