G1796955


Basic Information

Item Value
gene id G1796955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29249499 ~ 29249774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056485
ggggtaggtttcgggtcgagagccagaccctgtcccccggtacaaacaagGGGGCCTCACtacggtggcggtcagcactcctcttctgccgtccactggCTTGTTTGAGGgatcctggacggccctccaggtctccttggagcactgcacccactcctccaccgcaggagtcTGACTCGGATGCCAAGGTGCCAGGACCGTCTGGTAGCCCAACACACACTGGAACGGAGATAGGTTTGTCGAGGAGTGACGGAGTGAGTTTTGAGCCAACTCCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056485 True 276 lncRNA 0.61 1 29249499 29249774

Neighbor

gene id symbol gene type direction distance location
LOC118943584 LOC106582182 coding upstream 5847 29227671 ~ 29243652 (+)
LOC110501703 LOC106582182 coding upstream 36657 29178871 ~ 29212842 (+)
LOC110501702 LOC106582183 coding upstream 81746 29102113 ~ 29167753 (+)
LOC110501701 LOC106586531 coding upstream 155001 29063639 ~ 29094498 (+)
LOC110501700 LOC106582186 coding upstream 239218 28997763 ~ 29010281 (+)
tpt1 tpt1 coding downstream 5583 29255357 ~ 29258127 (+)
LOC110501705 NA coding downstream 11156 29260930 ~ 29264418 (+)
LOC110501706 LOC106582180 coding downstream 41163 29290937 ~ 29292575 (+)
tsc22d1 LOC107713726 coding downstream 91013 29340787 ~ 29427406 (+)
LOC110501709 LOC106582175 coding downstream 250376 29500150 ~ 29589083 (+)
G1796954 NA non-coding upstream 1334 29247937 ~ 29248165 (+)
G1796862 NA non-coding upstream 206042 29043150 ~ 29043457 (+)
G1796841 NA non-coding upstream 222031 29027075 ~ 29027468 (+)
G1796839 NA non-coding upstream 223826 29024618 ~ 29025673 (+)
G1796835 NA non-coding upstream 228903 29020043 ~ 29020596 (+)
G1796971 NA non-coding downstream 25823 29275597 ~ 29275818 (+)
G1796977 NA non-coding downstream 45930 29295704 ~ 29295929 (+)
G1796994 NA non-coding downstream 65817 29315591 ~ 29315838 (+)
G1796996 NA non-coding downstream 69236 29319010 ~ 29319230 (+)
G1796998 NA non-coding downstream 72507 29322281 ~ 29322495 (+)
LOC110502085 LOC106582160 other upstream 265273 28977890 ~ 28984226 (+)
G1795550 NA other upstream 1157383 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 1211421 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1336624 27898367 ~ 27912875 (+)
G1797582 NA other downstream 494418 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 673783 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1250882 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1638887 30888661 ~ 30891067 (+)
G1798579 NA other downstream 1996707 31246481 ~ 31292205 (+)

Expression


Co-expression Network