G1797357



Basic Information


Item Value
gene id G1797357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29498175 ~ 29498436 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2056912
gagttgagtcagtgtgttggcagcagccactcaatgttagtggtggctgtttaacagtctgatggccttgagatagaagctgtttttcagtcactcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggcaggtagtttgcccccggtgatgcgt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2056912 True 262 lncRNA 0.53 1 29498175 29498436

Neighbor


gene id symbol gene type direction distance location
LOC110501708 LOC106582177 coding downstream 57104 29433552 ~ 29441071 (-)
LOC118943585 NA coding downstream 172906 29324145 ~ 29325269 (-)
LOC110501699 NA coding downstream 671467 28819330 ~ 28826708 (-)
trnan-guu-200 NA coding downstream 778043 28720059 ~ 28720298 (-)
LOC110501696 LOC106582163 coding downstream 949610 28538705 ~ 28548565 (-)
dnajc15 dcj15 coding upstream 107627 29606063 ~ 29619908 (-)
tnfsf11 LOC106582173 coding upstream 208376 29706812 ~ 29727741 (-)
LOC110501713 LOC106582171 coding upstream 246933 29745369 ~ 29770850 (-)
LOC110501714 LOC106582170 coding upstream 337062 29835498 ~ 29846456 (-)
pou1f1 pou1f1 coding upstream 374824 29873260 ~ 29876558 (-)
G1797355 NA non-coding downstream 446 29497528 ~ 29497729 (-)
G1797350 NA non-coding downstream 3003 29494808 ~ 29495172 (-)
G1797338 NA non-coding downstream 12948 29484959 ~ 29485227 (-)
G1797334 NA non-coding downstream 14418 29483011 ~ 29483757 (-)
G1797324 NA non-coding downstream 28612 29469320 ~ 29469563 (-)
G1797440 NA non-coding upstream 51059 29549495 ~ 29550087 (-)
G1797454 LOC106582175 non-coding upstream 73846 29572282 ~ 29574570 (-)
G1797456 NA non-coding upstream 79224 29577660 ~ 29585719 (-)
G1797467 NA non-coding upstream 93793 29592229 ~ 29592456 (-)
G1797529 NA non-coding upstream 142130 29640566 ~ 29640839 (-)
G1797146 LOC106582182 other downstream 254526 29211664 ~ 29243649 (-)
G1796401 NA other downstream 871284 28626138 ~ 28626891 (-)
G1796239 NA other downstream 1059404 28434915 ~ 28451815 (-)
G1796204 NA other downstream 1163554 28334224 ~ 28334621 (-)
G1797556 NA other upstream 161031 29659467 ~ 29660947 (-)
G1797936 NA other upstream 473122 29971558 ~ 29978535 (-)
G1798732 LOC106582226 other upstream 572639 30071075 ~ 30071764 (-)
G1798781 NA other upstream 661798 30160234 ~ 30160686 (-)

Expression



Co-expression Network