G1797440


Basic Information

Item Value
gene id G1797440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 29549495 ~ 29550087 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2056998
gttttccccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccttgtgtttcctgtctctctgtgccagtgtatttatccctgtgtttcctgtctctctgggccagtgtatttatccctgtgtttccccagtgtatttatccctgtgtttcctgtctctctgtaccagtgtatttatccctgtgtttcctgtctctctgtgccagttcgtcttgcatgttagtcaagtcaaccagcgtggttTCCCATtctccttttgctattctctttttgctagtcctcctggttttgacccctgtctgactctggactactttcctgcctgcctgaacatcctgcctgccctgaccttgattctgcctgcccttcggtaccttttggactctgaactggttatgaccattttgcctgtccacga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2056998 True 507 lncRNA 0.47 2 29549495 29550087

Neighbor

gene id symbol gene type direction distance location
LOC110501708 LOC106582177 coding downstream 108424 29433552 ~ 29441071 (-)
LOC118943585 NA coding downstream 224226 29324145 ~ 29325269 (-)
LOC110501699 NA coding downstream 722787 28819330 ~ 28826708 (-)
trnan-guu-200 NA coding downstream 829363 28720059 ~ 28720298 (-)
LOC110501696 LOC106582163 coding downstream 1000930 28538705 ~ 28548565 (-)
dnajc15 dcj15 coding upstream 55976 29606063 ~ 29619908 (-)
tnfsf11 LOC106582173 coding upstream 156725 29706812 ~ 29727741 (-)
LOC110501713 LOC106582171 coding upstream 195282 29745369 ~ 29770850 (-)
LOC110501714 LOC106582170 coding upstream 285411 29835498 ~ 29846456 (-)
pou1f1 pou1f1 coding upstream 323173 29873260 ~ 29876558 (-)
G1797357 NA non-coding downstream 51059 29498175 ~ 29498436 (-)
G1797355 NA non-coding downstream 51766 29497528 ~ 29497729 (-)
G1797350 NA non-coding downstream 54323 29494808 ~ 29495172 (-)
G1797338 NA non-coding downstream 64268 29484959 ~ 29485227 (-)
G1797334 NA non-coding downstream 65738 29483011 ~ 29483757 (-)
G1797454 LOC106582175 non-coding upstream 22195 29572282 ~ 29574570 (-)
G1797456 NA non-coding upstream 27573 29577660 ~ 29585719 (-)
G1797467 NA non-coding upstream 42142 29592229 ~ 29592456 (-)
G1797529 NA non-coding upstream 90479 29640566 ~ 29640839 (-)
G1797560 NA non-coding upstream 114806 29664893 ~ 29665338 (-)
G1797146 LOC106582182 other downstream 305846 29211664 ~ 29243649 (-)
G1796401 NA other downstream 922604 28626138 ~ 28626891 (-)
G1796239 NA other downstream 1110724 28434915 ~ 28451815 (-)
G1796204 NA other downstream 1214874 28334224 ~ 28334621 (-)
G1797556 NA other upstream 109380 29659467 ~ 29660947 (-)
G1797936 NA other upstream 421471 29971558 ~ 29978535 (-)
G1798732 LOC106582226 other upstream 520988 30071075 ~ 30071764 (-)
G1798781 NA other upstream 610147 30160234 ~ 30160686 (-)

Expression


Co-expression Network