Gene
RNA
| Item | Value |
|---|---|
| gene id | G1798769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30133738 ~ 30137205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058456 | True | 252 | lncRNA | 0.53 | 2 | 30133738 | 30137205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501718 | LOC106582166 | coding | downstream | 138092 | 29940139 ~ 29995646 (-) |
| pou1f1 | pou1f1 | coding | downstream | 257180 | 29873260 ~ 29876558 (-) |
| LOC110501714 | LOC106582170 | coding | downstream | 287282 | 29835498 ~ 29846456 (-) |
| LOC110501713 | LOC106582171 | coding | downstream | 362888 | 29745369 ~ 29770850 (-) |
| tnfsf11 | LOC106582173 | coding | downstream | 405997 | 29706812 ~ 29727741 (-) |
| mxra5b | LOC106582197 | coding | upstream | 155905 | 30293110 ~ 30322552 (-) |
| LOC110501725 | LOC106586504 | coding | upstream | 227400 | 30364605 ~ 30382857 (-) |
| mab21l3 | mab21l3 | coding | upstream | 261970 | 30399175 ~ 30402935 (-) |
| si:dkey-67c22.2 | LOC106582233 | coding | upstream | 265997 | 30403202 ~ 30414069 (-) |
| LOC110502089 | LOC106582237 | coding | upstream | 319629 | 30456834 ~ 30459539 (-) |
| G1798731 | NA | non-coding | downstream | 66083 | 30067429 ~ 30067655 (-) |
| G1797962 | NA | non-coding | downstream | 130522 | 30003013 ~ 30003216 (-) |
| G1797961 | NA | non-coding | downstream | 132160 | 30001270 ~ 30001578 (-) |
| G1797958 | NA | non-coding | downstream | 133756 | 29999715 ~ 29999982 (-) |
| G1797935 | NA | non-coding | downstream | 156179 | 29969971 ~ 29977559 (-) |
| G1798771 | NA | non-coding | upstream | 3510 | 30140715 ~ 30140938 (-) |
| G1798775 | NA | non-coding | upstream | 9777 | 30146982 ~ 30147193 (-) |
| G1798717 | NA | non-coding | upstream | 10665 | 30147870 ~ 30149445 (-) |
| G1798780 | NA | non-coding | upstream | 22100 | 30159305 ~ 30159593 (-) |
| G1798782 | NA | non-coding | upstream | 23780 | 30160985 ~ 30161204 (-) |
| G1798732 | LOC106582226 | other | downstream | 61974 | 30071075 ~ 30071764 (-) |
| G1797936 | NA | other | downstream | 155203 | 29971558 ~ 29978535 (-) |
| G1797556 | NA | other | downstream | 472791 | 29659467 ~ 29660947 (-) |
| G1797146 | LOC106582182 | other | downstream | 890089 | 29211664 ~ 29243649 (-) |
| G1798781 | NA | other | upstream | 23029 | 30160234 ~ 30160686 (-) |
| G1798869 | NA | other | upstream | 349784 | 30486989 ~ 30519672 (-) |
| LOC110502090 | LOC106586488 | other | upstream | 823882 | 30960714 ~ 30963603 (-) |
| G1799132 | LOC106582249 | other | upstream | 839689 | 30976894 ~ 30995302 (-) |
| LOC110501748 | LOC106582253 | other | upstream | 901988 | 31037006 ~ 31042302 (-) |
