Gene
RNA
| Item | Value |
|---|---|
| gene id | G1798787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30167240 ~ 30167452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058474 | True | 213 | lncRNA | 0.37 | 1 | 30167240 | 30167452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501718 | LOC106582166 | coding | downstream | 171594 | 29940139 ~ 29995646 (-) |
| pou1f1 | pou1f1 | coding | downstream | 290682 | 29873260 ~ 29876558 (-) |
| LOC110501714 | LOC106582170 | coding | downstream | 320784 | 29835498 ~ 29846456 (-) |
| LOC110501713 | LOC106582171 | coding | downstream | 396390 | 29745369 ~ 29770850 (-) |
| tnfsf11 | LOC106582173 | coding | downstream | 439499 | 29706812 ~ 29727741 (-) |
| mxra5b | LOC106582197 | coding | upstream | 125658 | 30293110 ~ 30322552 (-) |
| LOC110501725 | LOC106586504 | coding | upstream | 197153 | 30364605 ~ 30382857 (-) |
| mab21l3 | mab21l3 | coding | upstream | 231723 | 30399175 ~ 30402935 (-) |
| si:dkey-67c22.2 | LOC106582233 | coding | upstream | 235750 | 30403202 ~ 30414069 (-) |
| LOC110502089 | LOC106582237 | coding | upstream | 289382 | 30456834 ~ 30459539 (-) |
| G1798782 | NA | non-coding | downstream | 6036 | 30160985 ~ 30161204 (-) |
| G1798780 | NA | non-coding | downstream | 7647 | 30159305 ~ 30159593 (-) |
| G1798717 | NA | non-coding | downstream | 17795 | 30147870 ~ 30149445 (-) |
| G1798775 | NA | non-coding | downstream | 20047 | 30146982 ~ 30147193 (-) |
| G1798771 | NA | non-coding | downstream | 26302 | 30140715 ~ 30140938 (-) |
| G1798789 | NA | non-coding | upstream | 2461 | 30169913 ~ 30170121 (-) |
| G1798790 | NA | non-coding | upstream | 2976 | 30170428 ~ 30170707 (-) |
| G1798809 | NA | non-coding | upstream | 33589 | 30201041 ~ 30203286 (-) |
| G1798810 | NA | non-coding | upstream | 36623 | 30204075 ~ 30204371 (-) |
| G1798813 | NA | non-coding | upstream | 44046 | 30211498 ~ 30211721 (-) |
| G1798781 | NA | other | downstream | 6554 | 30160234 ~ 30160686 (-) |
| G1798732 | LOC106582226 | other | downstream | 95476 | 30071075 ~ 30071764 (-) |
| G1797936 | NA | other | downstream | 188705 | 29971558 ~ 29978535 (-) |
| G1797556 | NA | other | downstream | 506293 | 29659467 ~ 29660947 (-) |
| G1798869 | NA | other | upstream | 319537 | 30486989 ~ 30519672 (-) |
| LOC110502090 | LOC106586488 | other | upstream | 793635 | 30960714 ~ 30963603 (-) |
| G1799132 | LOC106582249 | other | upstream | 809442 | 30976894 ~ 30995302 (-) |
| LOC110501748 | LOC106582253 | other | upstream | 871741 | 31037006 ~ 31042302 (-) |
| G1801195 | NA | other | upstream | 2536348 | 32703800 ~ 32704323 (-) |
