Gene
RNA
| Item | Value |
|---|---|
| gene id | G1798864 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30359238 ~ 30359802 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| heterogeneous nuclear ribonucleoprotein A0-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058554 | True | 310 | lncRNA | 0.59 | 2 | 30359238 | 30359802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mxra5b | LOC106582197 | coding | downstream | 36686 | 30293110 ~ 30322552 (-) |
| LOC110501718 | LOC106582166 | coding | downstream | 363592 | 29940139 ~ 29995646 (-) |
| pou1f1 | pou1f1 | coding | downstream | 482680 | 29873260 ~ 29876558 (-) |
| LOC110501714 | LOC106582170 | coding | downstream | 512782 | 29835498 ~ 29846456 (-) |
| LOC110501713 | LOC106582171 | coding | downstream | 588388 | 29745369 ~ 29770850 (-) |
| LOC110501725 | LOC106586504 | coding | upstream | 4803 | 30364605 ~ 30382857 (-) |
| mab21l3 | mab21l3 | coding | upstream | 39373 | 30399175 ~ 30402935 (-) |
| si:dkey-67c22.2 | LOC106582233 | coding | upstream | 43400 | 30403202 ~ 30414069 (-) |
| LOC110502089 | LOC106582237 | coding | upstream | 97032 | 30456834 ~ 30459539 (-) |
| LOC110501733 | LOC106582237 | coding | upstream | 140849 | 30500651 ~ 30506420 (-) |
| G1798824 | NA | non-coding | downstream | 62318 | 30296663 ~ 30296920 (-) |
| G1798813 | NA | non-coding | downstream | 147517 | 30211498 ~ 30211721 (-) |
| G1798810 | NA | non-coding | downstream | 154867 | 30204075 ~ 30204371 (-) |
| G1798809 | NA | non-coding | downstream | 155952 | 30201041 ~ 30203286 (-) |
| G1798910 | NA | non-coding | upstream | 65771 | 30425573 ~ 30425834 (-) |
| G1798870 | NA | non-coding | upstream | 90895 | 30450697 ~ 30490914 (-) |
| G1798869 | NA | non-coding | upstream | 127187 | 30486989 ~ 30519672 (-) |
| G1798875 | LOC106582240 | non-coding | upstream | 156531 | 30516333 ~ 30559449 (-) |
| G1798781 | NA | other | downstream | 198552 | 30160234 ~ 30160686 (-) |
| G1798732 | LOC106582226 | other | downstream | 287474 | 30071075 ~ 30071764 (-) |
| G1797936 | NA | other | downstream | 380703 | 29971558 ~ 29978535 (-) |
| G1797556 | NA | other | downstream | 698291 | 29659467 ~ 29660947 (-) |
| LOC110502090 | LOC106586488 | other | upstream | 601285 | 30960714 ~ 30963603 (-) |
| G1799132 | LOC106582249 | other | upstream | 617092 | 30976894 ~ 30995302 (-) |
| LOC110501748 | LOC106582253 | other | upstream | 679391 | 31037006 ~ 31042302 (-) |
| G1801195 | NA | other | upstream | 2343998 | 32703800 ~ 32704323 (-) |
