Gene
RNA
| Item | Value |
|---|---|
| gene id | G1799189 |
| gene name | nek5 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 30956740 ~ 30956989 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| nek5 | Predicted to enable ATP binding activity; metal ion binding activity; and protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation. Predicted to act upstream of or within positive regulation of cysteine-type endopeptidase activity and positive regulation of striated muscle cell differentiation. |
| description |
|---|
| serine/threonine-protein kinase Nek5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058909 | True | 250 | lncRNA | 0.55 | 1 | 30956740 | 30956989 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501740 | med4 | coding | downstream | 43164 | 30908672 ~ 30913576 (-) |
| LOC110501738 | LOC106582245 | coding | downstream | 48219 | 30888653 ~ 30908521 (-) |
| htr2aa | LOC106582206 | coding | downstream | 197427 | 30732318 ~ 30759313 (-) |
| esd | estd | coding | downstream | 254048 | 30695004 ~ 30702692 (-) |
| LOC110501729 | LOC106582237 | coding | downstream | 404689 | 30542283 ~ 30552051 (-) |
| LOC110502090 | LOC106586488 | coding | upstream | 3725 | 30960714 ~ 30963603 (-) |
| LOC110501745 | lrrc63 | coding | upstream | 8279 | 30965268 ~ 30967749 (-) |
| LOC110501744 | LOC106582250 | coding | upstream | 38335 | 30995324 ~ 30999592 (-) |
| LOC110501746 | LOC106582248 | coding | upstream | 47710 | 31004699 ~ 31022949 (-) |
| LOC110501748 | LOC106582253 | coding | upstream | 82901 | 31037006 ~ 31042302 (-) |
| G1799126 | LOC106582246 | non-coding | downstream | 12809 | 30941326 ~ 30943931 (-) |
| G1798989 | NA | non-coding | downstream | 346375 | 30609935 ~ 30610365 (-) |
| G1798875 | LOC106582240 | non-coding | downstream | 397291 | 30516333 ~ 30559449 (-) |
| G1798869 | NA | non-coding | downstream | 437701 | 30486989 ~ 30519672 (-) |
| G1798870 | NA | non-coding | downstream | 465826 | 30450697 ~ 30490914 (-) |
| G1799194 | NA | non-coding | upstream | 7738 | 30964727 ~ 30964949 (-) |
| G1799195 | NA | non-coding | upstream | 12821 | 30969810 ~ 30970040 (-) |
| G1799197 | NA | non-coding | upstream | 15871 | 30972860 ~ 30973255 (-) |
| G1799199 | NA | non-coding | upstream | 17888 | 30974877 ~ 30975179 (-) |
| G1798781 | NA | other | downstream | 796054 | 30160234 ~ 30160686 (-) |
| G1798732 | LOC106582226 | other | downstream | 884976 | 30071075 ~ 30071764 (-) |
| G1797936 | NA | other | downstream | 978205 | 29971558 ~ 29978535 (-) |
| LOC110501714 | LOC106582170 | other | downstream | 1113560 | 29835498 ~ 29846456 (-) |
| G1799132 | LOC106582249 | other | upstream | 19905 | 30976894 ~ 30995302 (-) |
| G1801195 | NA | other | upstream | 1746811 | 32703800 ~ 32704323 (-) |
| G1801071 | NA | other | upstream | 1802869 | 32759858 ~ 32777777 (-) |
