Gene
RNA
| Item | Value |
|---|---|
| gene id | G1799218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 31044055 ~ 31044440 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2058940 | True | 386 | lncRNA | 0.43 | 1 | 31044055 | 31044440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501748 | LOC106582253 | coding | downstream | 1753 | 31037006 ~ 31042302 (-) |
| LOC110501746 | LOC106582248 | coding | downstream | 21106 | 31004699 ~ 31022949 (-) |
| LOC110501744 | LOC106582250 | coding | downstream | 44463 | 30995324 ~ 30999592 (-) |
| LOC110501745 | lrrc63 | coding | downstream | 76306 | 30965268 ~ 30967749 (-) |
| LOC110502090 | LOC106586488 | coding | downstream | 80452 | 30960714 ~ 30963603 (-) |
| frzb | LOC106582261 | coding | upstream | 243847 | 31288287 ~ 31292216 (-) |
| LOC110501754 | LOC106582262 | coding | upstream | 251460 | 31295900 ~ 31363691 (-) |
| LOC110501758 | ppr1c | coding | upstream | 499888 | 31544328 ~ 31567507 (-) |
| itprid2 | ssfa2 | coding | upstream | 528377 | 31572817 ~ 31618605 (-) |
| itga4 | itga4 | coding | upstream | 691647 | 31736087 ~ 31774012 (-) |
| G1799216 | NA | non-coding | downstream | 8196 | 31035620 ~ 31035859 (-) |
| G1799213 | NA | non-coding | downstream | 10524 | 31033307 ~ 31033531 (-) |
| G1799125 | LOC106575914 | non-coding | downstream | 40412 | 31000572 ~ 31003643 (-) |
| G1799199 | NA | non-coding | downstream | 68876 | 30974877 ~ 30975179 (-) |
| G1799259 | NA | non-coding | upstream | 53195 | 31097635 ~ 31187383 (-) |
| G1799325 | NA | non-coding | upstream | 145288 | 31189728 ~ 31190041 (-) |
| G1799326 | NA | non-coding | upstream | 145642 | 31190082 ~ 31190502 (-) |
| G1799327 | NA | non-coding | upstream | 146358 | 31190798 ~ 31191017 (-) |
| G1799371 | LOC106582260 | non-coding | upstream | 211213 | 31255653 ~ 31257047 (-) |
| G1799132 | LOC106582249 | other | downstream | 48753 | 30976894 ~ 30995302 (-) |
| G1798869 | NA | other | downstream | 524383 | 30486989 ~ 30519672 (-) |
| G1798781 | NA | other | downstream | 883369 | 30160234 ~ 30160686 (-) |
| G1801195 | NA | other | upstream | 1659360 | 32703800 ~ 32704323 (-) |
| G1801071 | NA | other | upstream | 1715418 | 32759858 ~ 32777777 (-) |
| G1801352 | NA | other | upstream | 1906027 | 32950467 ~ 32953670 (-) |
| G1801331 | NA | other | upstream | 1913882 | 32958322 ~ 32960485 (-) |
| bard1 | bard1 | other | upstream | 3474066 | 34473620 ~ 34544232 (-) |
