G1799683



Basic Information


Item Value
gene id G1799683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31631384 ~ 31631595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2059462
ttgcttgtttgatggttcgtctgagggcgtagcggaatttcttataagtgtccagattaatgtcccgctccttgaaaacgcagcactagcctttagctcgatgtggatgttgcctataatccatggcttctggttgggatatatgTACGGTCACTTTGGGGatgacgtcgtcaatgcacttattgataaagctgATGACTGAGATGGTATAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2059462 True 212 lncRNA 0.45 1 31631384 31631595

Neighbor


gene id symbol gene type direction distance location
itprid2 ssfa2 coding downstream 12779 31572817 ~ 31618605 (-)
LOC110501758 ppr1c coding downstream 63877 31544328 ~ 31567507 (-)
LOC110501754 LOC106582262 coding downstream 267693 31295900 ~ 31363691 (-)
frzb LOC106582261 coding downstream 339168 31288287 ~ 31292216 (-)
LOC110501748 LOC106582253 coding downstream 589082 31037006 ~ 31042302 (-)
itga4 itga4 coding upstream 104492 31736087 ~ 31774012 (-)
ube2e3 ub2e3 coding upstream 312979 31944574 ~ 31998351 (-)
LOC118943602 NA coding upstream 547047 32178641 ~ 32179005 (-)
LOC110501778 LOC106586454 coding upstream 1224364 32855959 ~ 32882104 (-)
LOC110501785 LOC100194642 coding upstream 1539647 33171242 ~ 33180375 (-)
G1799679 NA non-coding downstream 4603 31626560 ~ 31626781 (-)
G1799657 NA non-coding downstream 48266 31582659 ~ 31583118 (-)
G1799464 NA non-coding downstream 185362 31445663 ~ 31446022 (-)
G1799378 NA non-coding downstream 368595 31262405 ~ 31262789 (-)
G1799371 LOC106582260 non-coding downstream 374337 31255653 ~ 31257047 (-)
G1800232 NA non-coding upstream 117328 31748923 ~ 31749178 (-)
G1800334 NA non-coding upstream 287939 31919534 ~ 31919993 (-)
G1800339 NA non-coding upstream 296031 31927626 ~ 31928431 (-)
G1800346 NA non-coding upstream 310394 31941989 ~ 31942454 (-)
G1800347 NA non-coding upstream 310863 31942458 ~ 31943250 (-)
G1799132 LOC106582249 other downstream 636082 30976894 ~ 30995302 (-)
LOC110502090 LOC106586488 other downstream 667850 30960714 ~ 30963603 (-)
G1798869 NA other downstream 1111712 30486989 ~ 30519672 (-)
G1798781 NA other downstream 1470698 30160234 ~ 30160686 (-)
G1801195 NA other upstream 1072205 32703800 ~ 32704323 (-)
G1801071 NA other upstream 1128263 32759858 ~ 32777777 (-)
G1801352 NA other upstream 1318872 32950467 ~ 32953670 (-)
G1801331 NA other upstream 1326727 32958322 ~ 32960485 (-)
bard1 bard1 other upstream 2886911 34473620 ~ 34544232 (-)

Expression



Co-expression Network