G1800759


Basic Information

Item Value
gene id G1800759
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 32902926 ~ 32903150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2060612
ctttataacattcctaccttgtcacaacctaAATAATTGgctgaaatgcattaagaaggaaggaaatgccacaaatgtacttttaacaagacacgcctgttaattgaaatgcattccaggtgactacctcatgaatctggatgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggcgactttgaagaatctcaaatatatttgtataacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2060612 True 225 lncRNA 0.38 1 32902926 32903150

Neighbor

gene id symbol gene type direction distance location
LOC110501779 LOC106582281 coding upstream 3908 32882915 ~ 32899018 (+)
LOC110501777 LOC106582279 coding upstream 56753 32817077 ~ 32846173 (+)
LOC110502125 LOC106582208 coding upstream 86018 32811982 ~ 32816908 (+)
ttn.1 NA coding upstream 93405 32622987 ~ 32809521 (+)
LOC110501775 LOC106582275 coding upstream 295104 32431098 ~ 32607822 (+)
LOC110501780 LOC106582282 coding downstream 1080 32904230 ~ 32908700 (+)
LOC110501782 LOC106582283 coding downstream 36427 32939577 ~ 32960500 (+)
LOC110501783 kansl1l coding downstream 61457 32964607 ~ 32993010 (+)
LOC110501784 LOC106582286 coding downstream 91750 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding downstream 94284 32997434 ~ 32997509 (+)
G1800724 NA non-coding upstream 91576 32811080 ~ 32811350 (+)
G1799951 NA non-coding upstream 814368 32087155 ~ 32088558 (+)
G1799909 NA non-coding upstream 894130 32008504 ~ 32008796 (+)
G1799863 ub2e3 non-coding upstream 904612 31944586 ~ 31998314 (+)
G1800761 NA non-coding downstream 14919 32918069 ~ 32918687 (+)
G1800800 NA non-coding downstream 268089 33171239 ~ 33176016 (+)
G1800801 NA non-coding downstream 272924 33176074 ~ 33180752 (+)
G1801513 NA non-coding downstream 314137 33217287 ~ 33217504 (+)
G1801521 NA non-coding downstream 319873 33223023 ~ 33223281 (+)
LOC110501767 LOC106582273 other upstream 528745 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1605507 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1610721 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2011859 30888661 ~ 30891067 (+)
G1798168 NA other upstream 2356972 30500656 ~ 30545954 (+)
G1800754 NA other downstream 7643 32910793 ~ 32914182 (+)
LOC110501795 LOC106596205 other downstream 2837289 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2971412 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3460446 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3531850 36435000 ~ 36520762 (+)

Expression


Co-expression Network