G1800754


Basic Information

Item Value
gene id G1800754
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 32910793 ~ 32914182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2060607
TCTTTTTAGGGTTTAGATCATGGTTCAAATGAGAACCTAAATGCTTTGTTATTGGTCATCGAAATGTTATACAGTTATGTTGCATGCACTTATTGGGAAACAAATCATGGTTCATTGCAGATGTATCAATCTAAACAGTCATTGGAGACTTAAGTCTCTCTAGAAGGTGTTGGTAGTCTTACGGCTGTTTTCCCAGTAGCAGGTGAAGACCGCAAGGGGGGAAAAAATCCATGAGTAGAGTGGGAAATCACCCCGTAAAGTTATATCAAATAATCATTGTGTTTTGTACACACTTTATTACGGGTGAATGTATGTCAgcgtagctaggtttccatccagttggtgacagattttcatgtgaatattctaaactctgcataaaaacaatatgcacattttcccaccagagatgtttccatctaattgacttgttgtggataaaaggctgtgcgtgatgacgtcgtccccataACTTTTGAGATTCAATTAAAAATCGCGTTTTCAACTCTACTGTTTGTTTTGTCCCACCCAAATGTTATTATATAGGGAAAGTTCCAACTCTGGTCTTTGCATGTGTTCTCtatagccaacagctcgcagacaCAGTGCGGGTTGGCTAATATTTGTTAAATGACAGCCAAGCATAGATATTTGTTAAATGGCAGCCAAGCatagatcatcatgtcaccagaataagacactCAATATATGTATTGGAAAACAACGTCAAGCTTGCACTTTCACcatcctgtgaagttcataacttatttcatctgtagcctaataaactgcatgctttcccgacgAGTCgaagtgggaggaccacacaccatatcatcccatgactccaagtttacttcaaaATGATGGTTCTTATATCAATATTTGGGCATTTACACTGCCATTTCTTGCCTAATATATTTTACCAACACAAAAAGATCCATGTTGAACTAACATTATCTGTGGGCATTAATAGAATTGTACTGAAACTTCTGCTTTCCATCACAACTATCGTGATTATTTTATACGTTTtgactttactcacataaaaactGTTGCTGGAAacgtgattttttttgttgtaaaagaATTGCCCATTCTGCAGTACTTTATATCCTACATTGCACATATAGTTGTAAGAGATTCAAGTTTGTCTTTCATTTAGGCTCCTGTCCTGGAAAATATCTTCATTAGTTGTCATCagtgccttttaaaaaaaaatatttccagCCATCCCCATATGTTTCATAGTCATTTTTGGTGACTGTCAATTAAATATACTGGCCCATCTGCACTTTCTGAAACAAACCCAATTCAAAGTTATTTACAATGAAAGTGGAACTTTCTGCTCTTTAAAAGGACGTCCCTTTCAAACGTTTTACCCCTCTTGCTATTACAGCAAAGACTGACCACTGGCATCTCTTCCGATTTTCTATCTTTTGTAGCACAGATATGATACATGTTTTATCTACCGGTAATCTATTGTTAGGGTGTTTTATGTGTGCTCTCACATTAGCAAAAGTGGTAGGATGGCTTTTAGTGGCCAAGAAAGTTCACATGACATTTTAAGTGAATGGTTATTTCTTTATAGCTATTACTGTATTACACACTGCCTAACTTTCTGAATAGTTGTGCATATTTGGCAGAGGTTACAGAAAAGGTTTGAGATATATTTTGTTGAGTCTCTCTTGCGTTGTTGTGTTTCTATGGTATTTGTTGTAACAGATTGATATAATTGTTGCATGTGAAGCGAAACACAATAACAGCCACTTTTGAAAGTTACCTTGACAAAATGAAATGGTTTGAAATGATTTTTCTTGTTATATTGCCTTAGTCATTTCGGTCTTGCTATTTTGTCTTGCATGATGTCTTTCTTTTTGTGCTTTGTTGTTCATGTCTATTAAAGTGAAATTGTTTTACTTATAGAATTGATAGCTACCTAGTTAGCTAGTTATATTATGTCAACATTGTGTTTTACATCAAATGCTAGCTCTCACTTGTTACATTTCTACTGACAATCAGGGACAAATAATACCCTCGTTCTGGATTCAACAGCTACTAAACTTTACTCTGTAAACATTCCCTCTGTAGAATGTATAGATAGTTGGTATCTCTGCTGTAAATAAGTAGAATATCTTTGGCTTGTGTATTTTCAGTCCTGGACAACCTGGTGGTTGTAGCTACAGTGAGGACTGGTGTACAATGTTTTATGGAGCCACTTTTCATTAGATTTTCCATGCAGTTTAATGTTTGTCACTTCGTGTTCTGTCAAACCATAGGTATTTTCCAcctattttttaacattttatttcccCCTTTAGTGATTTGACTCGCAGTAATTAAAGTCCGCCCATCCTTACATGAAATAATAGTTCCAGTATTGTAGTGTGGCCTGGACTGTCAGTTTGAAGAATACCTGGGGCATCATCCTCGTAAATTCATCAACATTATTATTCATTGTTGTGGCATAGAACTAAAATGTTGACCTGTAGTCAGTCATGAAATGTGAAAAATGTcttcttttttgttttgttttttcatttcatttttagTTTTCAACTAAACCTACTGTACACCGGTGAAAGAAAGCACTTTCAAAAGCACGGTGTATAGTTAGTTGTATGTGTATTTTTCCACCACCATCTTAGATTTGAACTTACAGTATAAGTTTGAGACCCAAAATGTTCCTTCTTCTACTCCTTTCCTGAGGGAACTGAAAAGATTGCTCTTATGGTTGTGAAAAAGCAACCCATTTTTGGGACAGTTCCACCACTTACAGTAACCCCCTATCCATAAACTGACCATAAGTGTCCTTGTATAAACTGGGAAAAAATGAAACTTGTTTCATCAGATTGGGGGGAAAAGTATAAATGTTAAACTTTTTGATAGATGCTTTCTTCTATTTTTGAAAAATATGTTGCTTGTAAAAAAGGCTCTGAAGTATGTATGTCATATAGTCATTATTGCAGACAGTCCTCAGTTAATATCAGATCATTGTTTGATTTTGGATATGTTGAGCTTCTTTGGCAGTTGTGGACAAGAGCTTCTTCCTTTGAGACGGAGTTATTTTGACTCAGATGTTCAATCATTGAGCTACAGAAGGAAGGATAGTAAACTCACTGTTAGTCAAGTTATGATGAATTATTATATTTCACAGATGGTTGATCAAAAGCAAGATGTTGATTTGCATGGTCTTTTAGTTGTCGATTCGATTGATCTGGATATTATATGTAAATGTACTGCTTTAATTGTAGCTTATTTTATTTCAGTCAAGTTCTATTAGATTTATGCAATATATTATATGGACTTGTGAAAAATCTGATTCTTCAATTGTTGGTTTTTGATTCTTTATCATGTCCTTCCAAATAAAACTAATGAtccatacagtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2060607 True 3390 TUCP 0.35 1 32910793 32914182

Neighbor

gene id symbol gene type direction distance location
LOC110501780 LOC106582282 coding upstream 2093 32904230 ~ 32908700 (+)
LOC110501779 LOC106582281 coding upstream 11775 32882915 ~ 32899018 (+)
LOC110501777 LOC106582279 coding upstream 64620 32817077 ~ 32846173 (+)
LOC110502125 LOC106582208 coding upstream 93885 32811982 ~ 32816908 (+)
ttn.1 NA coding upstream 101272 32622987 ~ 32809521 (+)
LOC110501782 LOC106582283 coding downstream 25395 32939577 ~ 32960500 (+)
LOC110501783 kansl1l coding downstream 50425 32964607 ~ 32993010 (+)
LOC110501784 LOC106582286 coding downstream 80718 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding downstream 83252 32997434 ~ 32997509 (+)
LOC118943604 NA coding downstream 282423 33196605 ~ 33199316 (+)
G1800759 NA non-coding upstream 7643 32902926 ~ 32903150 (+)
G1800724 NA non-coding upstream 99443 32811080 ~ 32811350 (+)
G1799951 NA non-coding upstream 822235 32087155 ~ 32088558 (+)
G1799909 NA non-coding upstream 901997 32008504 ~ 32008796 (+)
G1800761 NA non-coding downstream 3887 32918069 ~ 32918687 (+)
G1800800 NA non-coding downstream 257057 33171239 ~ 33176016 (+)
G1800801 NA non-coding downstream 261892 33176074 ~ 33180752 (+)
G1801513 NA non-coding downstream 303105 33217287 ~ 33217504 (+)
G1801521 NA non-coding downstream 308841 33223023 ~ 33223281 (+)
LOC110501767 LOC106582273 other upstream 536612 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1613374 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1618588 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2019726 30888661 ~ 30891067 (+)
G1798168 NA other upstream 2364839 30500656 ~ 30545954 (+)
LOC110501795 LOC106596205 other downstream 2826257 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2960380 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3449414 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3520818 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 5165684 38079807 ~ 38213191 (+)

Expression


Co-expression Network