G1800761


Basic Information

Item Value
gene id G1800761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 32918069 ~ 32918687 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2060614
cttccatgccatccctaggaggggtgcgtcacttgagtgggttgtgccgtggtggagatctttgtgggctatactcggccttgtctctggatggtaagttggtggttgaagatatccctcttgtggtgtgcgggctgtgctttggcaaagtgtgtggggttatatcctgcctgtttggccctgtccgggggtatcgtcggatggggccacagtgtctcccgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcagggggctagggtcagtctgttatatctggagtatttctcctgtcttatccagtgtcctgtgtgaatttaagtatgctctctaattctctctttctttctttcattctttctttctctctctctcggaggacctgagccccaggaccatacctcaggactacctggcctgatgactccttgctgtctccagtccacctggccgtgctgctgctccagtttcaactgttctgcctgcggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacctgctgttttcacctctctagagacagcaggagtggtagagatactctgaatgatcggctatga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2060614 True 619 lncRNA 0.53 1 32918069 32918687

Neighbor

gene id symbol gene type direction distance location
LOC110501780 LOC106582282 coding upstream 9369 32904230 ~ 32908700 (+)
LOC110501779 LOC106582281 coding upstream 19051 32882915 ~ 32899018 (+)
LOC110501777 LOC106582279 coding upstream 71896 32817077 ~ 32846173 (+)
LOC110502125 LOC106582208 coding upstream 101161 32811982 ~ 32816908 (+)
ttn.1 NA coding upstream 108548 32622987 ~ 32809521 (+)
LOC110501782 LOC106582283 coding downstream 20890 32939577 ~ 32960500 (+)
LOC110501783 kansl1l coding downstream 45920 32964607 ~ 32993010 (+)
LOC110501784 LOC106582286 coding downstream 76213 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding downstream 78747 32997434 ~ 32997509 (+)
LOC118943604 NA coding downstream 277918 33196605 ~ 33199316 (+)
G1800759 NA non-coding upstream 14919 32902926 ~ 32903150 (+)
G1800724 NA non-coding upstream 106719 32811080 ~ 32811350 (+)
G1799951 NA non-coding upstream 829511 32087155 ~ 32088558 (+)
G1799909 NA non-coding upstream 909273 32008504 ~ 32008796 (+)
G1800800 NA non-coding downstream 252552 33171239 ~ 33176016 (+)
G1800801 NA non-coding downstream 257387 33176074 ~ 33180752 (+)
G1801513 NA non-coding downstream 298600 33217287 ~ 33217504 (+)
G1801521 NA non-coding downstream 304336 33223023 ~ 33223281 (+)
G1801549 NA non-coding downstream 326153 33244840 ~ 33245183 (+)
G1800754 NA other upstream 3887 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 543888 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1620650 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1625864 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2027002 30888661 ~ 30891067 (+)
LOC110501795 LOC106596205 other downstream 2821752 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2955875 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3444909 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3516313 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 5161179 38079807 ~ 38213191 (+)

Expression


Co-expression Network