G1801352


Basic Information

Item Value
gene id G1801352
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 32950467 ~ 32953670 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2061278
TCAAGAGTGTATTGGTATTGCTTGATTTTTTATTACACTTTACATGCAATGTTGTCATGCAATGTTGTCATGCATGTTGTGCAAAGACAATCTTATGGGGGAAGAAGAAACTCACTTTTTACTCAAAGTAGAGCGCCGGTAACCATGCAGAATTGATAATGAGGCATtgagctgtaaaaaaaaaaaagcgtgAGGGCTAAATATTATTAGTTGGGCATGATCACATTTAATTATTTATAATACATTATCTATGTCTTCCTTACATTCCTAATACATCTATCAAATTGATTGAACAGGCTTGCTGCACCATTACAacaaatacacaatacacaatgtCAGTGATAGTCATTCCTCTTTCCACACTAGGGTTGCAAAACTCCCGGTAATCTAGCAAACATACCAACATTCTTGAGAGATTCCAAAATTACTAGTTACAGGGAATATTCAGGGATGTATACAGGGAATATTTTGGGATGTAAACAGGGAATATTCAGGGATGTATACAGGGAATATTCTGGGATGTATACAGGGAATATTCTGGGATGTAAACAGGGAATATTCTGTGATGTATACAGGGAATATTCAGGGATGTATGCAGGGAATATTCAGGTAGGTATACAGGGAATATTCAGGGATGAATACAGGGAATATTATGGGATGTATACAGGGAATATTCAGGAAGGTATACAGGGAATATTGAGGGATGTATACAGGGAATATTCAGAAAGGTATACAGGGAATATTCCCTCCTTCTGCAACTCCCAGCCTGTCCCTGTCCTTACCAgctggttgatctctctctggaTCTCATGCAGTGTGGCGCTCCTGGAGAGCAGTGGGTCATAGTGAGAGTTGTTGACACTGAACGTCCCCAAGAAAGTTTTTCTCGCGTGCAGTCTCGTCCGTTCTCAATGTCAAGGCCCAGGGGACACTCGCAGCTGAAGGAGCCCCTGGTGTTAACACACGTAGAGTCACTGGGACATGGGCCCGAGGGGCCGGGGCCAATCTCACACTCATCCACATCTGGACAcagcagagacagaggacagagagggcagtGTGAACATAGAGGACAAGATGACTATAGTGAATACAATCAGCAATATAAAGACATTTTCACATCTGGACAAACAAAGCAACACAGATACATAGACAGAGGACAAGGACAGAGGACAGCTGACAGAGGACAGATGACAGAGATCAGTTACATAAAACTGCACAAAACGTGAATCATTAAACCCTCACTAAAACTCTCTCTGGTCCTGGGCCAAGAGACTTGGGGCTCTATAGCTGCTGCATTAGGCATCCATTTCCCTATGGGTTGTATACAGGTTGTTCACACCTCTGTTACTATGCCAGGTTGCTAGGGTCACctagactcaatcatggacactcttactgacagttgtggttgctttgcgtgatgtattgttgtctctaccttcttgccctttgtgctgttgtctgtgcccaataatgtttgtaccatattttgtgctgctaccatgttgtgctgctgccatagaaagaggagtgagaggccccggtgcacaactgagcaagaggacaagtacattagagtgtctattttgagaaacagacgcctcacaagtcctcaactggcagcttcgtgaaatagtacccgcaaaacaccagtctcaacgtcaacagggaagaggcgactccaggatgctggccttctaggcagagttgcaaagaaaaagtcattctcagactggccaataaaaagaaaagattaagatgggcaaaagaacacaaacactggacaggTGAACTCGGCTGGGAATGATAGGTTGAACTCACCCTCATTGCAGATAGGTCCTGTCCATgctgacagacagtaacaggtGAATTCCCTCCCTCCATAGGTCTCTCTACACCCACCTCCGTTCAGACAGGGGTTGGGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2061278 True 1929 TUCP 0.44 3 32950467 32953670

Neighbor

gene id symbol gene type direction distance location
LOC110501778 LOC106586454 coding downstream 68363 32855959 ~ 32882104 (-)
LOC118943602 NA coding downstream 771462 32178641 ~ 32179005 (-)
ube2e3 ub2e3 coding downstream 952116 31944574 ~ 31998351 (-)
itga4 itga4 coding downstream 1176455 31736087 ~ 31774012 (-)
itprid2 ssfa2 coding downstream 1331862 31572817 ~ 31618605 (-)
LOC110501785 LOC100194642 coding upstream 217572 33171242 ~ 33180375 (-)
LOC110502092 erbb4 coding upstream 448078 33401748 ~ 33509768 (-)
LOC118936582 erbb4 coding upstream 543994 33497664 ~ 33632178 (-)
LOC110501786 LOC106586446 coding upstream 733512 33687182 ~ 33927932 (-)
LOC110502093 LOC106582292 coding upstream 997383 33951053 ~ 33983502 (-)
G1801327 NA non-coding downstream 27205 32919863 ~ 32923262 (-)
G1801322 NA non-coding downstream 36574 32913333 ~ 32913893 (-)
G1801066 NA non-coding downstream 140944 32806574 ~ 32809523 (-)
G1801067 NA non-coding downstream 144353 32800789 ~ 32806114 (-)
G1801069 NA non-coding downstream 150825 32798605 ~ 32799642 (-)
G1801333 NA non-coding upstream 126 32953796 ~ 32956422 (-)
G1801334 NA non-coding upstream 3328 32956998 ~ 32957504 (-)
G1801331 NA non-coding upstream 4652 32958322 ~ 32960485 (-)
G1801479 LOC106582286 non-coding upstream 188996 33142666 ~ 33143768 (-)
G1801548 NA non-coding upstream 290900 33244570 ~ 33244783 (-)
G1801071 NA other downstream 172690 32759858 ~ 32777777 (-)
G1801195 NA other downstream 246144 32703800 ~ 32704323 (-)
LOC110501748 LOC106582253 other downstream 1908251 31037006 ~ 31042302 (-)
G1799132 LOC106582249 other downstream 1955165 30976894 ~ 30995302 (-)
LOC110502090 LOC106586488 other downstream 1986933 30960714 ~ 30963603 (-)
bard1 bard1 other upstream 1564836 34473620 ~ 34544232 (-)
G1803964 NA other upstream 2172809 35126479 ~ 35126833 (-)
LOC110502094 LOC106582301 other upstream 2253793 35138330 ~ 35471205 (-)
G1805927 LOC106582360 other upstream 3104174 36057844 ~ 36059768 (-)

Expression


Co-expression Network