G1801513


Basic Information

Item Value
gene id G1801513
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 33217287 ~ 33217504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2061448
actctaaggtctactacacctgttatatttggcgcatgtgacaaataaaatttgattagatttgacacacacacacacgcgcacacacacaaatgctgcAGATTGTCTTGTTTGTGTCCaaggtcctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2061448 True 218 lncRNA 0.45 1 33217287 33217504

Neighbor

gene id symbol gene type direction distance location
LOC118943604 NA coding upstream 17971 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 46143 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 219778 32997434 ~ 32997509 (+)
LOC110501783 kansl1l coding upstream 224277 32964607 ~ 32993010 (+)
LOC110501782 LOC106582283 coding upstream 256787 32939577 ~ 32960500 (+)
trnaa-ugc-176 NA coding downstream 577521 33795025 ~ 33795098 (+)
LOC110501788 vwc2l coding downstream 1246229 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 1385375 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 1564001 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 1830228 35047732 ~ 35049458 (+)
G1800801 NA non-coding upstream 36535 33176074 ~ 33180752 (+)
G1800800 NA non-coding upstream 41271 33171239 ~ 33176016 (+)
G1800761 NA non-coding upstream 298600 32918069 ~ 32918687 (+)
G1800759 NA non-coding upstream 314137 32902926 ~ 32903150 (+)
LOC110502125 LOC106582208 non-coding upstream 400529 32811982 ~ 32816908 (+)
G1801521 NA non-coding downstream 5519 33223023 ~ 33223281 (+)
G1801549 NA non-coding downstream 27336 33244840 ~ 33245183 (+)
G1801558 NA non-coding downstream 32352 33249856 ~ 33250067 (+)
G1801562 NA non-coding downstream 36054 33253558 ~ 33253765 (+)
G1801578 NA non-coding downstream 46897 33264401 ~ 33264607 (+)
G1800754 NA other upstream 303105 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 843106 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1919868 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1925082 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2326220 30888661 ~ 30891067 (+)
LOC110501795 LOC106596205 other downstream 2522935 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2657058 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3146092 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3217496 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 4862362 38079807 ~ 38213191 (+)

Expression


Co-expression Network