G1801549


Basic Information

Item Value
gene id G1801549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 33244840 ~ 33245183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2061484
aattatggtggaaaataagtatgtggtcacctacaaacaagcaagatttctggctctcacagacctgcaacttcttctttaagaggctactcttgtcctccactcgttacctgtattaatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcactctccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctttaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatgaaagacataca

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2061484 True 344 lncRNA 0.41 1 33244840 33245183

Neighbor

gene id symbol gene type direction distance location
LOC118943604 NA coding upstream 45524 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 73696 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 247331 32997434 ~ 32997509 (+)
LOC110501783 kansl1l coding upstream 251830 32964607 ~ 32993010 (+)
LOC110501782 LOC106582283 coding upstream 284340 32939577 ~ 32960500 (+)
trnaa-ugc-176 NA coding downstream 549842 33795025 ~ 33795098 (+)
LOC110501788 vwc2l coding downstream 1218550 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 1357696 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 1536322 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 1802549 35047732 ~ 35049458 (+)
G1801521 NA non-coding upstream 21559 33223023 ~ 33223281 (+)
G1801513 NA non-coding upstream 27336 33217287 ~ 33217504 (+)
G1800801 NA non-coding upstream 64088 33176074 ~ 33180752 (+)
G1800800 NA non-coding upstream 68824 33171239 ~ 33176016 (+)
G1800761 NA non-coding upstream 326153 32918069 ~ 32918687 (+)
G1801558 NA non-coding downstream 4673 33249856 ~ 33250067 (+)
G1801562 NA non-coding downstream 8375 33253558 ~ 33253765 (+)
G1801578 NA non-coding downstream 19218 33264401 ~ 33264607 (+)
G1801600 NA non-coding downstream 37478 33282661 ~ 33283022 (+)
G1801647 NA non-coding downstream 73768 33318951 ~ 33319191 (+)
G1800754 NA other upstream 330658 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 870659 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1947421 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1952635 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2353773 30888661 ~ 30891067 (+)
LOC110501795 LOC106596205 other downstream 2495256 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2629379 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3118413 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3189817 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 4834683 38079807 ~ 38213191 (+)

Expression


Co-expression Network