G1802063


Basic Information

Item Value
gene id G1802063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 33983207 ~ 33983551 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2062026
GGACATATTTTAGATCATCATCATAGCAGACAAACTGTCATCCTTGTAggctaaataaatatataattatcgctatttattttctttatttcgTTACCTTATAATCGCAGGAGATTAAATAATCCCATCACCTATGCTGTGAGGTAAGAACTACACATGTTCACCCATTGGAATGTCTTGCTTGGAATACAATGCAATGTAATACAGAAATTCCGCAGGCAACAACAGTTAATCCTCCAATACTTCCTCCATCTTCGAAAGCAGAGCAGACGAGCCGCCGAGTGtctgttctgggaacctggtctaaCACAGAGAAacggatctctctctctctggctgtctgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2062026 True 345 lncRNA 0.40 1 33983207 33983551

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-176 NA coding upstream 188109 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 783891 33196605 ~ 33199316 (+)
LOC110501784 LOC106582286 coding upstream 812063 32994900 ~ 33171144 (+)
trnaa-ugc-175 NA coding upstream 985698 32997434 ~ 32997509 (+)
LOC110501783 kansl1l coding upstream 990197 32964607 ~ 32993010 (+)
LOC110501788 vwc2l coding downstream 480182 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 619328 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 797954 34781505 ~ 34790502 (+)
LOC118943586 NA coding downstream 1064181 35047732 ~ 35049458 (+)
LOC110501795 LOC106596205 coding downstream 1756876 35740427 ~ 35760519 (+)
G1802061 NA non-coding upstream 1936 33980941 ~ 33981271 (+)
G1801974 NA non-coding upstream 144026 33838830 ~ 33839181 (+)
G1801846 NA non-coding upstream 243718 33715692 ~ 33739489 (+)
G1801647 NA non-coding upstream 664016 33318951 ~ 33319191 (+)
G1801600 NA non-coding upstream 700185 33282661 ~ 33283022 (+)
G1802501 NA non-coding downstream 18846 34002397 ~ 34002692 (+)
G1802599 NA non-coding downstream 138964 34122515 ~ 34162841 (+)
G1802993 NA non-coding downstream 397603 34381154 ~ 34381454 (+)
G1803014 NA non-coding downstream 408436 34391987 ~ 34392210 (+)
G1803025 NA non-coding downstream 417268 34400819 ~ 34401027 (+)
G1800754 NA other upstream 1069025 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 1609026 32317123 ~ 32374208 (+)
G1798597 NA other upstream 2685788 31293552 ~ 31297419 (+)
G1798579 NA other upstream 2691002 31246481 ~ 31292205 (+)
G1798397 NA other upstream 3092140 30888661 ~ 30891067 (+)
G1804873 NA other downstream 1891011 35874562 ~ 35875452 (+)
G1805191 NA other downstream 2380045 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 2451449 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 4096315 38079807 ~ 38213191 (+)

Expression


Co-expression Network