G1803795


Basic Information

Item Value
gene id G1803795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 35016809 ~ 35051462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2063860
cgacacaagcggttcacaaaatgtttcggattttatcaaacaaaagatcattcattgtgtaacaatgagcattggaattgcaaacagacgaagatcgtcaaagGCCATCCGTTAACCCGGTCAACTCCAATTGGACACAGCGACCTTATTGGTCAAAACTTAAACTTAAAGCCGGTAGCAACCAGAAGAAGTGCTGcgatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2063860 True 201 lncRNA 0.42 3 35016809 35051462

Neighbor

gene id symbol gene type direction distance location
LOC110501793 LOC106582300 coding upstream 226307 34781505 ~ 34790502 (+)
LOC110501792 LOC106582299 coding upstream 244767 34602879 ~ 34772042 (+)
LOC110501788 vwc2l coding upstream 517319 34463733 ~ 34499490 (+)
trnaa-ugc-176 NA coding upstream 1221711 33795025 ~ 33795098 (+)
LOC118943604 NA coding upstream 1817493 33196605 ~ 33199316 (+)
LOC110501795 LOC106596205 coding downstream 688965 35740427 ~ 35760519 (+)
LOC110501797 LOC106582303 coding downstream 717719 35769181 ~ 35780544 (+)
LOC110501798 NA coding downstream 731721 35783183 ~ 35814912 (+)
LOC110502095 LOC106582360 coding downstream 892048 35943510 ~ 36060137 (+)
LOC110501801 tsn coding downstream 1191693 36243155 ~ 36247834 (+)
G1803708 NA non-coding upstream 70082 34946493 ~ 34946727 (+)
G1803693 NA non-coding upstream 79781 34936802 ~ 34937028 (+)
G1803689 NA non-coding upstream 81284 34935300 ~ 34935525 (+)
G1803586 NA non-coding upstream 147431 34869160 ~ 34869378 (+)
G1803549 NA non-coding upstream 174235 34842284 ~ 34842574 (+)
G1803868 NA non-coding downstream 57888 35109350 ~ 35109693 (+)
G1803963 NA non-coding downstream 75059 35126521 ~ 35126960 (+)
G1803971 NA non-coding downstream 79161 35130623 ~ 35176705 (+)
G1804125 NA non-coding downstream 323132 35374594 ~ 35379543 (+)
G1804653 NA non-coding downstream 646146 35697608 ~ 35699437 (+)
G1800754 NA other upstream 2102627 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 2642628 32317123 ~ 32374208 (+)
G1798597 NA other upstream 3719390 31293552 ~ 31297419 (+)
G1798579 NA other upstream 3724604 31246481 ~ 31292205 (+)
G1798397 NA other upstream 4125742 30888661 ~ 30891067 (+)
G1804873 NA other downstream 823100 35874562 ~ 35875452 (+)
G1805191 NA other downstream 1312134 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 1383538 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 3028404 38079807 ~ 38213191 (+)

Expression


Co-expression Network