G1805010


Basic Information

Item Value
gene id G1805010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36067494 ~ 36067723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2065141
GTATATATCCTGGAAACAGCTCCATTACTTGAAGGCTGTAGGGAATATTTGGAGATATTCTTGTCTTTCATTGTAAATCCTTTTCTTTTTAGATTTCTACCTCAAGATCTGGTGTGACCAGTTTGCTTTTGTGGTGTCTAACTATTCAGACAATTTTAAAAAGTCTGCACATAGTGTATATCATATCATTTAAGTACTTGGAGAAATTAAGGTGGTTActtgttatatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2065141 True 230 lncRNA 0.33 1 36067494 36067723

Neighbor

gene id symbol gene type direction distance location
LOC110502095 LOC106582360 coding upstream 7357 35943510 ~ 36060137 (+)
LOC110501798 NA coding upstream 252582 35783183 ~ 35814912 (+)
LOC110501797 LOC106582303 coding upstream 286950 35769181 ~ 35780544 (+)
LOC110501795 LOC106596205 coding upstream 306975 35740427 ~ 35760519 (+)
LOC118943586 NA coding upstream 1018036 35047732 ~ 35049458 (+)
LOC110501801 tsn coding downstream 175432 36243155 ~ 36247834 (+)
LOC118943606 NA coding downstream 272031 36339754 ~ 36345450 (+)
LOC110501802 LOC106582356 coding downstream 285947 36353670 ~ 36359762 (+)
LOC110502098 LOC106586421 coding downstream 294379 36362102 ~ 36376836 (+)
LOC110501803 LOC106582352 coding downstream 311783 36379506 ~ 36406219 (+)
G1805002 NA non-coding upstream 21893 36045373 ~ 36045601 (+)
G1804997 NA non-coding upstream 31061 36036227 ~ 36036433 (+)
G1804995 NA non-coding upstream 34223 36032942 ~ 36033271 (+)
G1804988 NA non-coding upstream 47127 36020100 ~ 36020367 (+)
G1805024 NA non-coding downstream 23670 36091393 ~ 36091633 (+)
G1805026 NA non-coding downstream 25472 36093195 ~ 36102877 (+)
G1805029 NA non-coding downstream 38371 36106094 ~ 36108964 (+)
G1805042 LOC106582358 non-coding downstream 59982 36127705 ~ 36128553 (+)
G1805044 NA non-coding downstream 63889 36131612 ~ 36132062 (+)
G1804873 NA other upstream 192042 35874562 ~ 35875452 (+)
G1800754 NA other upstream 3153312 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 3693313 32317123 ~ 32374208 (+)
G1798597 NA other upstream 4770075 31293552 ~ 31297419 (+)
G1805191 NA other downstream 295873 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 367277 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 2012143 38079807 ~ 38213191 (+)
G1807306 NA other downstream 2231404 38282124 ~ 38316253 (+)
G1807376 NA other downstream 2338414 38406137 ~ 38411163 (+)

Expression


Co-expression Network