G1805158


Basic Information

Item Value
gene id G1805158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36313205 ~ 36338220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2065316
TATAAGAGACAGActgcaacatcgagagcatcctgaccggttgcatcactgcctggtacggtaattgctcggcctccgaccgcaaggcacttcagagggtagtgcgtacggcccagtacatcactggggcaaagctgcctgccatccaggacctctccaCCAGGTGGtatcagagaaaggccctaaaaattgtcaaagaccccagccaccccagtcatagactgttctctctactaccgcatggcaagcggtaccggagtgccaagtctaggacaaaaaggcttctcaacagtttttaccctcaaatcaaatggttacccgaactatttgcattgtgtgccacccccaacccttcttttacgctgctgctactctctgtttatcatatatgcatagtcactttaactatacattcatgtacatactacctcaattgggccgaccaaccagtgctccagcacattggctaaccgggctatctgcattgtgtcccaccacccgccaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2065316 True 506 lncRNA 0.51 2 36313205 36338220

Neighbor

gene id symbol gene type direction distance location
LOC110501801 tsn coding upstream 65371 36243155 ~ 36247834 (+)
LOC110502095 LOC106582360 coding upstream 253068 35943510 ~ 36060137 (+)
LOC110501798 NA coding upstream 498293 35783183 ~ 35814912 (+)
LOC110501797 LOC106582303 coding upstream 532661 35769181 ~ 35780544 (+)
LOC110501795 LOC106596205 coding upstream 552686 35740427 ~ 35760519 (+)
LOC118943606 NA coding downstream 1534 36339754 ~ 36345450 (+)
LOC110501802 LOC106582356 coding downstream 15450 36353670 ~ 36359762 (+)
LOC110502098 LOC106586421 coding downstream 23882 36362102 ~ 36376836 (+)
LOC110501803 LOC106582352 coding downstream 41286 36379506 ~ 36406219 (+)
LOC110501805 dirc2 coding downstream 96799 36435000 ~ 36520762 (+)
G1805152 NA non-coding upstream 4828 36307550 ~ 36308377 (+)
G1805149 NA non-coding upstream 10998 36301850 ~ 36302207 (+)
G1805123 LOC106582309 non-coding upstream 61961 36248134 ~ 36251244 (+)
G1805068 NA non-coding upstream 81128 36229748 ~ 36232077 (+)
G1805107 NA non-coding upstream 93837 36218801 ~ 36219368 (+)
G1805198 NA non-coding downstream 37366 36375586 ~ 36375795 (+)
G1805209 hspbap1 non-coding downstream 77080 36415300 ~ 36425655 (+)
G1805231 NA non-coding downstream 112841 36451061 ~ 36451452 (+)
G1805234 NA non-coding downstream 119573 36457793 ~ 36458456 (+)
G1804873 NA other upstream 437753 35874562 ~ 35875452 (+)
G1800754 NA other upstream 3399023 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 3939024 32317123 ~ 32374208 (+)
G1798597 NA other upstream 5015786 31293552 ~ 31297419 (+)
G1805191 NA other downstream 25376 36363596 ~ 36363930 (+)
LOC110501842 LOC106586352 other downstream 1741646 38079807 ~ 38213191 (+)
G1807306 NA other downstream 1960907 38282124 ~ 38316253 (+)
G1807376 NA other downstream 2067917 38406137 ~ 38411163 (+)

Expression


Co-expression Network