G1806716 (LOC106581475)


Basic Information

Item Value
gene id G1806716
gene name LOC106581475
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37539406 ~ 37539640 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067037
ctcctggacagtctgtggtgcaacttggcgttggtggatggagcgagacatgatgtcccagatgtgctcaattggattcaggtctggggaacgggcaggcgaGTCCATagtatcaatgccttcctcttgcaggaactgctgacacactccagccacatgaggtcttgcattgtcttgcattaggaggaacccagggccaaccgcaccagcatatggtctcacaaggggtctgagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067037 True 235 lncRNA 0.55 1 37539406 37539640

Neighbor

gene id symbol gene type direction distance location
LOC110501815 LOC100194727 coding upstream 181954 37254802 ~ 37357452 (+)
LOC110501814 LOC106582344 coding upstream 300775 37222661 ~ 37238631 (+)
LOC110501812 LOC106582346 coding upstream 317516 37153568 ~ 37221890 (+)
LOC110501811 LOC106586394 coding upstream 393156 37120935 ~ 37146250 (+)
LOC110501808 sec22a coding upstream 569015 36949459 ~ 36970391 (+)
LOC110501820 LOC106582329 coding downstream 225089 37764729 ~ 37783640 (+)
LOC110501823 LOC106582327 coding downstream 249717 37789357 ~ 37790416 (+)
LOC110501825 LOC106582330 coding downstream 254369 37794009 ~ 37794948 (+)
LOC110501824 LOC106582328 coding downstream 264143 37803783 ~ 37804836 (+)
LOC110501828 LOC106582323 coding downstream 264468 37804108 ~ 37811761 (+)
G1805813 NA non-coding upstream 14273 37524919 ~ 37525133 (+)
G1805796 NA non-coding upstream 43111 37495716 ~ 37496295 (+)
G1805725 NA non-coding upstream 109773 37379675 ~ 37429633 (+)
G1805703 NA non-coding upstream 180430 37358150 ~ 37358976 (+)
G1805697 NA non-coding upstream 202252 37335977 ~ 37337154 (+)
G1806785 NA non-coding downstream 106148 37645788 ~ 37652191 (+)
G1806881 NA non-coding downstream 308387 37848027 ~ 37848640 (+)
G1806882 NA non-coding downstream 309145 37848785 ~ 37849012 (+)
G1806883 NA non-coding downstream 310638 37850278 ~ 37850545 (+)
G1807088 NA non-coding downstream 369190 37908830 ~ 37912450 (+)
LOC110501805 dirc2 other upstream 1096329 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1175476 36363596 ~ 36363930 (+)
G1804873 NA other upstream 1663954 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 1779980 35740427 ~ 35760519 (+)
G1800754 NA other upstream 4625224 32910793 ~ 32914182 (+)
LOC110501842 LOC106586352 other downstream 540226 38079807 ~ 38213191 (+)
G1807306 NA other downstream 759487 38282124 ~ 38316253 (+)
G1807376 NA other downstream 866497 38406137 ~ 38411163 (+)
G1807566 NA other downstream 1323100 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1609440 39149080 ~ 39151333 (+)

Expression


Co-expression Network