G1806883


Basic Information

Item Value
gene id G1806883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37850278 ~ 37850545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067244
gtccatggagtggtgcgtcacttgagtgatcttcctgtccggggtTGGCACCCCCCTCGGGTTTGTGCTGTGGGGGAGatttttgtgggctatactctgccttgtctcagggtagtaggttggtggttgaagatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatcctgcctgtttggccctgtccgggggtatcatcggacgggtccacagtgtctcctggcccctcctgtctcagcctccagcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067244 True 268 lncRNA 0.58 1 37850278 37850545

Neighbor

gene id symbol gene type direction distance location
LOC110502126 LOC106582321 coding upstream 23233 37824691 ~ 37827045 (+)
LOC110501829 LOC106582324 coding upstream 27527 37821888 ~ 37822751 (+)
LOC110501830 LOC106582325 coding upstream 32581 37815130 ~ 37817697 (+)
LOC110501828 LOC106582323 coding upstream 38517 37804108 ~ 37811761 (+)
LOC110501824 LOC106582328 coding upstream 45442 37803783 ~ 37804836 (+)
LOC110501832 LOC100380630 coding downstream 10947 37861492 ~ 37902868 (+)
coq10b LOC106582315 coding downstream 145540 37996085 ~ 38004691 (+)
LOC110501840 hsp10 coding downstream 161304 38011849 ~ 38015731 (+)
mob3 LOC106582314 coding downstream 161459 38012004 ~ 38029035 (+)
LOC110501842 LOC106586352 coding downstream 229262 38079807 ~ 38213191 (+)
G1806882 NA non-coding upstream 1266 37848785 ~ 37849012 (+)
G1806881 NA non-coding upstream 1638 37848027 ~ 37848640 (+)
G1806785 NA non-coding upstream 198087 37645788 ~ 37652191 (+)
G1806716 LOC106581475 non-coding upstream 310638 37539406 ~ 37539640 (+)
G1805813 NA non-coding upstream 325145 37524919 ~ 37525133 (+)
G1807088 NA non-coding downstream 58285 37908830 ~ 37912450 (+)
G1807089 NA non-coding downstream 62464 37913009 ~ 37913740 (+)
G1807134 NA non-coding downstream 119817 37970362 ~ 37971174 (+)
G1807138 sf3b1 non-coding downstream 124651 37975196 ~ 38006133 (+)
G1807226 NA non-coding downstream 259665 38110210 ~ 38111033 (+)
LOC110501805 dirc2 other upstream 1407201 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1486348 36363596 ~ 36363930 (+)
G1804873 NA other upstream 1974826 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2090852 35740427 ~ 35760519 (+)
G1800754 NA other upstream 4936096 32910793 ~ 32914182 (+)
G1807306 NA other downstream 448582 38282124 ~ 38316253 (+)
G1807376 NA other downstream 555592 38406137 ~ 38411163 (+)
G1807566 NA other downstream 1012195 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1298535 39149080 ~ 39151333 (+)

Expression


Co-expression Network