G1807089


Basic Information

Item Value
gene id G1807089
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37913009 ~ 37913740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2067482
AAGGTGAGCGCAAGACATGACCATTTTATTTAAACCCATCCAGTCCCTACAGATTAGTAAACTCACTGTCCCTGAGAGTCTATAGTGTCCACCAGGTCTGCACTATCCTGGTCGTCCAGAAGGAGGCGTACACACGACGTATGACCATtcatcactgaggacagggaaggagagagattagaacaagagaaacagacagacagagacagagaaacagacagacagacagagacagagagacagagacagaaagatagagacagagagaaacagacagaaagacagagacagacacagagagagagaaacagatagacagacagagacagagacagagaaacagaaagacagaaagatagagacagagagagaaacagacagaaagacagagagagaaacagacagaaagacagagacagacagagagacagagacagaaagatagagacagagagagaaacagacagaaagacagagacagacacagagagacagaaagatagagacagagagagaaacagacagaaagacagagagagaaacagacagaaagacagagacagacgagagagagagaattcacaAAAAGGGACAAACgccaaattgagactctgtatgcagaattctgaaaaaatatcctctgtgtacaacgtaaaacaccaaataatgcatgcag

Function

NR:

description
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2067482 True 676 lncRNA 0.43 2 37913009 37913740

Neighbor

gene id symbol gene type direction distance location
LOC110501832 LOC100380630 coding upstream 10141 37861492 ~ 37902868 (+)
LOC110502126 LOC106582321 coding upstream 85964 37824691 ~ 37827045 (+)
LOC110501829 LOC106582324 coding upstream 90258 37821888 ~ 37822751 (+)
LOC110501830 LOC106582325 coding upstream 95312 37815130 ~ 37817697 (+)
LOC110501828 LOC106582323 coding upstream 101248 37804108 ~ 37811761 (+)
coq10b LOC106582315 coding downstream 82345 37996085 ~ 38004691 (+)
LOC110501840 hsp10 coding downstream 98109 38011849 ~ 38015731 (+)
mob3 LOC106582314 coding downstream 98264 38012004 ~ 38029035 (+)
LOC110501842 LOC106586352 coding downstream 166067 38079807 ~ 38213191 (+)
LOC110501844 tbccd1 coding downstream 537085 38450825 ~ 38456288 (+)
G1807088 NA non-coding upstream 559 37908830 ~ 37912450 (+)
G1806883 NA non-coding upstream 62464 37850278 ~ 37850545 (+)
G1806882 NA non-coding upstream 63997 37848785 ~ 37849012 (+)
G1806881 NA non-coding upstream 64369 37848027 ~ 37848640 (+)
G1806785 NA non-coding upstream 260818 37645788 ~ 37652191 (+)
G1807134 NA non-coding downstream 56622 37970362 ~ 37971174 (+)
G1807138 sf3b1 non-coding downstream 61456 37975196 ~ 38006133 (+)
G1807226 NA non-coding downstream 196470 38110210 ~ 38111033 (+)
G1807247 NA non-coding downstream 229011 38142751 ~ 38143249 (+)
G1807256 NA non-coding downstream 242176 38155916 ~ 38158979 (+)
LOC110501805 dirc2 other upstream 1469932 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1549079 36363596 ~ 36363930 (+)
G1804873 NA other upstream 2037557 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2153583 35740427 ~ 35760519 (+)
G1800754 NA other upstream 4998827 32910793 ~ 32914182 (+)
G1807306 NA other downstream 385387 38282124 ~ 38316253 (+)
G1807376 NA other downstream 492397 38406137 ~ 38411163 (+)
G1807566 NA other downstream 949000 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1235340 39149080 ~ 39151333 (+)

Expression


Co-expression Network