G1807750 (LOC106582372)


Basic Information

Item Value
gene id G1807750
gene name LOC106582372
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 38193422 ~ 38195096 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2068246
CAAAAGTCTCATCAAACAGTGGGTCATCCTGGTTCTGTGCTGCAGTCCTGGTCCGTTGCTCAGCGCAGTCCGCCGGTACCCCATGCAGCTCCAGAACCACGTAGGGATCTATAACCTCTCCTTTAGCCCCGGCGCCCTGCGGCTTGGGCAGGCTGTGAGCGCTGATCACCTTCACCCTGAGGGTCTGAGGGGGAACGCCAGGCACACAGCCCTGGGTCACAGCACTGAAGTAGGACACCTCATCTCTCATGACCCCTGGCCGCAGCACGAAGCCACAGCCCCCGTTCTGGGTGAACCGGCCTCTGTGGAGGTCCAGCATGGCCCCGGGGGTCTGCTGGTTGAGGGCCACTAGCTGGACCCCGCCCTTCCAGTAGCCCTGGGGGTTGGGGTTGGAGGAGTCCAGGCGGACGGAGCTTGGCCGAACACGGCTCAGGGTGCGCTTGGTGAAGCTTACTAATTCCTCTGGGCTCTCACTGGCCAGCCGTCCCGCTTCTCCCTCCCCCAGGGAGCACAGTGTCCAATAGGGCGACTCAGGGGGAAAGGGCGTGCCCGGGGTGGAGGGGGTGCTGGGCGGGGAGTGCTGCTGTCCTTGTTTCCTTGTTTCTCGGTGGTTGTAGAAGCTACGGCTTCCGGTTCTAGCCACGCCCACAAGATCTGATAGCTCATGTCGGAGGCGGAGTCTCCTGGGCTGAGGGGGCGGGGGCACCACTAAAACCGCGCCCAGTTCCTCCTCCCCAGGTATGGTCATTTTCCGACCAGCCAAGGGCCCGCCTCCCCCtatctcctcgtcctcctctgacACCTCTCCCTCAGACCCCTCCTCTTCGGGCGGTAGCTTCTTCCCCACCAGCAGCACTCGGCCCTTCAGCTGCTCTGGGGAGGGTAGGGTGGTGGCTCGCCCCCCCAGGCTGACCGGCAGGGCCTCAGGGGTGTAGAGACGTGTAGAGAACACTTTCCTCAGGTGCTGGGCCAAGGTACGCTGCTGGGAGGGAGAACAGCGCTGGCACAGGTAGAGCAGAAGTGGATAGGGCGAGGTCAGGAAGGCGTACTTATTGACCACCTCCAGGGCACTGCGGATGGTGACCGGGgcgtggtggtgatgatggtggtggtggtggtggtggtgggcatCAGGACCATAGTCCACCCCCAGGAGCGGCTCCCCCTCTGGGCCGTCTGTCACCCCCAGCTCTAGGCACCGACACCCGGCCTGGAGAGCCCTGGAGATAGGACCGATAGGAGGTACTGATGTAGTAGTGGGACAGGGGCAGGCTCATATCCTGACACACTGCCTGGTGCTCCACGTCAAACAGCTGGCACTCTGGGGACTGCAGGTAGCGGGAGAATCCATCCAGAGCCAGtagacctctctctttcccagggCCGGAGGGCTCGAAGCGTCGGACCAGTTCCAGACAGCCCTCGGCCGTGGCCAGAGACAGGCCTTGCTCCGTCTCCAGGAAGAGACGGAGGTCCTGGGCGTCCAGACACTCGCGGTCCTTGGAGAGTTGGACCAACAGGAAGTAGACGTCTGGGCGAGTGCATAGCTCACAGAAGGCCTCCTGGAACTCCTTGCGCGTCACGTGAGACGTCAGCTTCTCCTTGCTCCTCTGGATCTCCTTGAACCTCAG

Function

NR:

description
inactive phospholipase C-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2068246 True 1631 TUCP 0.63 2 38193422 38195096

Neighbor

gene id symbol gene type direction distance location
LOC110501839 rftn2 coding downstream 129431 38029502 ~ 38063991 (-)
LOC110501838 LOC100136430 coding downstream 181285 38004829 ~ 38012137 (-)
LOC110501835 LOC106586372 coding downstream 197484 37972212 ~ 37995938 (-)
LOC110502141 LOC106582316 coding downstream 226137 37903148 ~ 37967285 (-)
LOC110501831 LOC106582318 coding downstream 332514 37851828 ~ 37860908 (-)
LOC110502144 LOC106586344 coding upstream 109372 38304468 ~ 38383049 (-)
LOC110501845 LOC106582367 coding upstream 243088 38438184 ~ 38450743 (-)
LOC110501846 NA coding upstream 272095 38467191 ~ 38472484 (-)
LOC110501850 dbr1 coding upstream 290725 38485821 ~ 38491495 (-)
LOC110502145 LOC106586333 coding upstream 325776 38520872 ~ 38726596 (-)
G1807673 NA non-coding downstream 120939 38070866 ~ 38072483 (-)
G1807607 NA non-coding downstream 265157 37927837 ~ 37928265 (-)
G1807588 NA non-coding downstream 319562 37872767 ~ 37873860 (-)
G1807587 LOC100380630 non-coding downstream 326485 37864964 ~ 37866937 (-)
G1807754 NA non-coding upstream 6905 38202001 ~ 38202385 (-)
G1807731 NA non-coding upstream 13694 38208790 ~ 38241273 (-)
G1807785 NA non-coding upstream 104088 38299184 ~ 38300194 (-)
G1807805 NA non-coding upstream 117159 38312255 ~ 38312661 (-)
G1807893 NA non-coding upstream 308762 38503858 ~ 38504231 (-)
G1807020 LOC105030512 other downstream 433174 37759971 ~ 37760248 (-)
G1806449 NA other downstream 1080948 37043561 ~ 37112474 (-)
G1806393 NA other downstream 1257335 36935658 ~ 36936087 (-)
LOC110501806 sema5b other downstream 1614711 36552698 ~ 36837583 (-)
G1805927 LOC106582360 other downstream 2133654 36057844 ~ 36059768 (-)
G1808299 NA other upstream 749040 38944136 ~ 38944530 (-)
LOC110501878 LOC106582406 other upstream 2541552 40736648 ~ 40813437 (-)
LOC110501886 rhg15 other upstream 3252803 41447899 ~ 41523764 (-)

Expression


Co-expression Network