Gene
RNA
| Item | Value |
|---|---|
| gene id | G1807750 |
| gene name | LOC106582372 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 38193422 ~ 38195096 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| inactive phospholipase C-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2068246 | True | 1631 | TUCP | 0.63 | 2 | 38193422 | 38195096 |
38,190,400
38,190,800
38,191,200
38,191,600
38,192,000
38,192,400
38,192,800
38,193,200
38,193,600
38,194,000
38,194,400
38,194,800
38,195,200
38,195,600
38,196,000
38,196,400
38,196,800
38,197,200
38,197,600
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501839 | rftn2 | coding | downstream | 129431 | 38029502 ~ 38063991 (-) |
| LOC110501838 | LOC100136430 | coding | downstream | 181285 | 38004829 ~ 38012137 (-) |
| LOC110501835 | LOC106586372 | coding | downstream | 197484 | 37972212 ~ 37995938 (-) |
| LOC110502141 | LOC106582316 | coding | downstream | 226137 | 37903148 ~ 37967285 (-) |
| LOC110501831 | LOC106582318 | coding | downstream | 332514 | 37851828 ~ 37860908 (-) |
| LOC110502144 | LOC106586344 | coding | upstream | 109372 | 38304468 ~ 38383049 (-) |
| LOC110501845 | LOC106582367 | coding | upstream | 243088 | 38438184 ~ 38450743 (-) |
| LOC110501846 | NA | coding | upstream | 272095 | 38467191 ~ 38472484 (-) |
| LOC110501850 | dbr1 | coding | upstream | 290725 | 38485821 ~ 38491495 (-) |
| LOC110502145 | LOC106586333 | coding | upstream | 325776 | 38520872 ~ 38726596 (-) |
| G1807673 | NA | non-coding | downstream | 120939 | 38070866 ~ 38072483 (-) |
| G1807607 | NA | non-coding | downstream | 265157 | 37927837 ~ 37928265 (-) |
| G1807588 | NA | non-coding | downstream | 319562 | 37872767 ~ 37873860 (-) |
| G1807587 | LOC100380630 | non-coding | downstream | 326485 | 37864964 ~ 37866937 (-) |
| G1807754 | NA | non-coding | upstream | 6905 | 38202001 ~ 38202385 (-) |
| G1807731 | NA | non-coding | upstream | 13694 | 38208790 ~ 38241273 (-) |
| G1807785 | NA | non-coding | upstream | 104088 | 38299184 ~ 38300194 (-) |
| G1807805 | NA | non-coding | upstream | 117159 | 38312255 ~ 38312661 (-) |
| G1807893 | NA | non-coding | upstream | 308762 | 38503858 ~ 38504231 (-) |
| G1807020 | LOC105030512 | other | downstream | 433174 | 37759971 ~ 37760248 (-) |
| G1806449 | NA | other | downstream | 1080948 | 37043561 ~ 37112474 (-) |
| G1806393 | NA | other | downstream | 1257335 | 36935658 ~ 36936087 (-) |
| LOC110501806 | sema5b | other | downstream | 1614711 | 36552698 ~ 36837583 (-) |
| G1805927 | LOC106582360 | other | downstream | 2133654 | 36057844 ~ 36059768 (-) |
| G1808299 | NA | other | upstream | 749040 | 38944136 ~ 38944530 (-) |
| LOC110501878 | LOC106582406 | other | upstream | 2541552 | 40736648 ~ 40813437 (-) |
| LOC110501886 | rhg15 | other | upstream | 3252803 | 41447899 ~ 41523764 (-) |
