G1809173


Basic Information

Item Value
gene id G1809173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40037028 ~ 40037304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2069909
aaatctggcagtagcttctgattaaattcaattttcacagaaccgtttTGTTGCAATTTAGATGAGGCTCTCTTtttcagatatcagtaagtgggCTGGAGgtagggcatgaaagggataacgaatccagttgtttgtgtcatccgtttcgggaaagtacctgcgtaattgcgcacccaactcactcaggtgcttcgctatatcacatttgacattgtccgtaagcttaaATTAATTTGCACACCAAAAAATCATAcgatgatggaaagacctgtgt

Function

NR:

description
PREDICTED: zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2069909 True 277 lncRNA 0.41 1 40037028 40037304

Neighbor

gene id symbol gene type direction distance location
LOC118943662 NA coding upstream 123988 39912913 ~ 39913040 (+)
si:ch73-116o1.2 LOC106582394 coding upstream 124166 39890643 ~ 39912862 (+)
LOC110501860 LOC106582389 coding upstream 470404 39478254 ~ 39566624 (+)
zgc:162780 yh09 coding upstream 581903 39451592 ~ 39455125 (+)
LOC110501853 LOC106582378 coding upstream 1162714 38868673 ~ 38875945 (+)
acmsd acmsd coding downstream 134431 40171735 ~ 40185460 (+)
LOC110501869 ccnt2 coding downstream 153279 40190583 ~ 40200438 (+)
LOC110502148 rab3gap1 coding downstream 178716 40216020 ~ 40263466 (+)
LOC110501870 r3hdm1 coding downstream 320643 40357947 ~ 40418247 (+)
LOC118943589 NA coding downstream 342929 40380233 ~ 40386211 (+)
G1809169 NA non-coding upstream 6085 40030740 ~ 40030943 (+)
G1809167 NA non-coding upstream 9992 40026814 ~ 40027036 (+)
G1809164 NA non-coding upstream 13401 40023333 ~ 40023627 (+)
G1809163 NA non-coding upstream 15205 40021620 ~ 40021823 (+)
G1809162 NA non-coding upstream 19681 40017146 ~ 40017347 (+)
G1809174 NA non-coding downstream 119 40037423 ~ 40037728 (+)
G1809175 NA non-coding downstream 932 40038236 ~ 40038596 (+)
G1809159 NA non-coding downstream 42802 40080106 ~ 40083967 (+)
G1809401 NA non-coding downstream 139332 40176636 ~ 40205483 (+)
G1809107 NA other upstream 111633 39924414 ~ 39925395 (+)
G1808787 NA other upstream 342160 39693913 ~ 39694868 (+)
G1808209 NA other upstream 885695 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1173892 38862740 ~ 38863136 (+)
G1807376 NA other upstream 1625865 38406137 ~ 38411163 (+)
G1810553 NA other downstream 1152385 41189689 ~ 41192492 (+)
G1810740 NA other downstream 1427174 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 2219251 42256417 ~ 42389468 (+)
G1812428 NA other downstream 2686368 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2692297 42688215 ~ 42735867 (+)

Expression


Co-expression Network