G1809401


Basic Information

Item Value
gene id G1809401
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40176636 ~ 40205483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2070154
gcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatgcaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2070154 True 471 lncRNA 0.44 2 40176636 40205483

Neighbor

gene id symbol gene type direction distance location
LOC118943662 NA coding upstream 263596 39912913 ~ 39913040 (+)
si:ch73-116o1.2 LOC106582394 coding upstream 263774 39890643 ~ 39912862 (+)
LOC110501860 LOC106582389 coding upstream 610012 39478254 ~ 39566624 (+)
zgc:162780 yh09 coding upstream 721511 39451592 ~ 39455125 (+)
LOC110501853 LOC106582378 coding upstream 1302322 38868673 ~ 38875945 (+)
LOC110502148 rab3gap1 coding downstream 10537 40216020 ~ 40263466 (+)
LOC110501870 r3hdm1 coding downstream 152464 40357947 ~ 40418247 (+)
LOC118943589 NA coding downstream 174750 40380233 ~ 40386211 (+)
ubxn4 ubxn4 coding downstream 233681 40439164 ~ 40449478 (+)
nmi LOC106582386 coding downstream 289383 40494866 ~ 40500658 (+)
G1809159 NA non-coding upstream 92669 40080106 ~ 40083967 (+)
G1809175 NA non-coding upstream 138040 40038236 ~ 40038596 (+)
G1809174 NA non-coding upstream 138908 40037423 ~ 40037728 (+)
G1809173 NA non-coding upstream 139332 40037028 ~ 40037304 (+)
G1809169 NA non-coding upstream 145693 40030740 ~ 40030943 (+)
G1809450 NA non-coding downstream 20995 40226478 ~ 40226683 (+)
G1809469 NA non-coding downstream 43756 40249239 ~ 40249526 (+)
G1809499 NA non-coding downstream 61513 40266996 ~ 40267411 (+)
G1809504 NA non-coding downstream 64707 40270190 ~ 40270565 (+)
G1809107 NA other upstream 251241 39924414 ~ 39925395 (+)
G1808787 NA other upstream 481768 39693913 ~ 39694868 (+)
G1808209 NA other upstream 1025303 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1313500 38862740 ~ 38863136 (+)
G1807376 NA other upstream 1765473 38406137 ~ 38411163 (+)
G1810553 NA other downstream 984206 41189689 ~ 41192492 (+)
G1810740 NA other downstream 1258995 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 2051072 42256417 ~ 42389468 (+)
G1812428 NA other downstream 2518189 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2524118 42688215 ~ 42735867 (+)

Expression


Co-expression Network