Gene
RNA
| Item | Value |
|---|---|
| gene id | G1809499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 40266996 ~ 40267411 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2070260 | True | 416 | lncRNA | 0.33 | 1 | 40266996 | 40267411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502148 | rab3gap1 | coding | upstream | 3530 | 40216020 ~ 40263466 (+) |
| LOC110501869 | ccnt2 | coding | upstream | 66558 | 40190583 ~ 40200438 (+) |
| acmsd | acmsd | coding | upstream | 81536 | 40171735 ~ 40185460 (+) |
| LOC118943662 | NA | coding | upstream | 353956 | 39912913 ~ 39913040 (+) |
| si:ch73-116o1.2 | LOC106582394 | coding | upstream | 354134 | 39890643 ~ 39912862 (+) |
| LOC110501870 | r3hdm1 | coding | downstream | 90536 | 40357947 ~ 40418247 (+) |
| LOC118943589 | NA | coding | downstream | 112822 | 40380233 ~ 40386211 (+) |
| ubxn4 | ubxn4 | coding | downstream | 171753 | 40439164 ~ 40449478 (+) |
| nmi | LOC106582386 | coding | downstream | 227455 | 40494866 ~ 40500658 (+) |
| LOC110501874 | LOC106582403 | coding | downstream | 282662 | 40550073 ~ 40558749 (+) |
| G1809469 | NA | non-coding | upstream | 17470 | 40249239 ~ 40249526 (+) |
| G1809450 | NA | non-coding | upstream | 40313 | 40226478 ~ 40226683 (+) |
| G1809401 | NA | non-coding | upstream | 61513 | 40176636 ~ 40205483 (+) |
| G1809159 | NA | non-coding | upstream | 183029 | 40080106 ~ 40083967 (+) |
| G1809504 | NA | non-coding | downstream | 2779 | 40270190 ~ 40270565 (+) |
| G1809514 | NA | non-coding | downstream | 9891 | 40277302 ~ 40277852 (+) |
| G1809516 | NA | non-coding | downstream | 11589 | 40279000 ~ 40279369 (+) |
| G1809544 | NA | non-coding | downstream | 27073 | 40294484 ~ 40294757 (+) |
| G1809582 | NA | non-coding | downstream | 68130 | 40335541 ~ 40428461 (+) |
| G1809107 | NA | other | upstream | 341601 | 39924414 ~ 39925395 (+) |
| G1808787 | NA | other | upstream | 572128 | 39693913 ~ 39694868 (+) |
| G1808209 | NA | other | upstream | 1115663 | 39149080 ~ 39151333 (+) |
| G1807566 | NA | other | upstream | 1403860 | 38862740 ~ 38863136 (+) |
| G1807376 | NA | other | upstream | 1855833 | 38406137 ~ 38411163 (+) |
| G1810553 | NA | other | downstream | 922278 | 41189689 ~ 41192492 (+) |
| G1810740 | NA | other | downstream | 1197067 | 41464478 ~ 41466349 (+) |
| LOC110501889 | LOC106582433 | other | downstream | 1989144 | 42256417 ~ 42389468 (+) |
| G1812428 | NA | other | downstream | 2456261 | 42723672 ~ 42724114 (+) |
| LOC110502157 | LOC106582435 | other | downstream | 2462190 | 42688215 ~ 42735867 (+) |
