G1809582


Basic Information

Item Value
gene id G1809582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40335541 ~ 40428461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2070363
acattcatgaacatttctctgactacgttcctccattgagtcaaaaaaacttctgattccaggaggaccatgagctgttgctatcgataaggtctctgattcatcattttcacctcgaatagaagtagagggacttttgtcgtgagcgctgagggaactttatgcacttggccagatgattctgcatctttgttgcattcttcacatatgatttagCACAGTATTTACAAATGTATACACCTtgtccttctacattagctgcagtgaaatgtatcCACTCATCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2070363 True 285 lncRNA 0.40 2 40335541 40428461

Neighbor

gene id symbol gene type direction distance location
LOC110502148 rab3gap1 coding upstream 72075 40216020 ~ 40263466 (+)
LOC110501869 ccnt2 coding upstream 135103 40190583 ~ 40200438 (+)
acmsd acmsd coding upstream 150081 40171735 ~ 40185460 (+)
LOC118943662 NA coding upstream 422501 39912913 ~ 39913040 (+)
si:ch73-116o1.2 LOC106582394 coding upstream 422679 39890643 ~ 39912862 (+)
ubxn4 ubxn4 coding downstream 10703 40439164 ~ 40449478 (+)
nmi LOC106582386 coding downstream 66405 40494866 ~ 40500658 (+)
LOC110501874 LOC106582403 coding downstream 121612 40550073 ~ 40558749 (+)
LOC110501877 LOC106582405 coding downstream 317421 40745882 ~ 40758226 (+)
LOC110501885 LOC106582417 coding downstream 858025 41286486 ~ 41363126 (+)
G1809544 NA non-coding upstream 40784 40294484 ~ 40294757 (+)
G1809516 NA non-coding upstream 56172 40279000 ~ 40279369 (+)
G1809514 NA non-coding upstream 57689 40277302 ~ 40277852 (+)
G1809504 NA non-coding upstream 64976 40270190 ~ 40270565 (+)
G1809499 NA non-coding upstream 68130 40266996 ~ 40267411 (+)
G1809774 NA non-coding downstream 88093 40516554 ~ 40516781 (+)
G1809781 NA non-coding downstream 94718 40523179 ~ 40523423 (+)
G1809784 NA non-coding downstream 95846 40524307 ~ 40524652 (+)
G1809786 NA non-coding downstream 97304 40525765 ~ 40526163 (+)
G1809806 NA non-coding downstream 111716 40540177 ~ 40540403 (+)
G1809107 NA other upstream 410146 39924414 ~ 39925395 (+)
G1808787 NA other upstream 640673 39693913 ~ 39694868 (+)
G1808209 NA other upstream 1184208 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1472405 38862740 ~ 38863136 (+)
G1807376 NA other upstream 1924378 38406137 ~ 38411163 (+)
G1810553 NA other downstream 761228 41189689 ~ 41192492 (+)
G1810740 NA other downstream 1036017 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 1828094 42256417 ~ 42389468 (+)
G1812428 NA other downstream 2295211 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2301140 42688215 ~ 42735867 (+)

Expression


Co-expression Network