G1810110


Basic Information

Item Value
gene id G1810110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40757108 ~ 40758215 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2070932
TTTGGTTTATTGCATTTCACGTGTGAACTTCTGGATTAAAGCAGCCTCAAGAATCACAGACCCGTTTCTAAAACAGCTGATTTTGTAGAGCGAGACAATACCCGTCTCTTTCAGACCTAAGTGCACTGATTACTGTCACGAGCACAATATTCAAGGATTTGAGGGTTAACTGGATCTCAGGACCTGTGAACAAGACACAAGGTCTCTATTCTGAAGGTAACATGGATCAAATAAGAGCTCTTGAGATTCATCTCATGACATCAGAAAAGTAAACCCTTATCTTCTGATAAAAAAATGGCGGGTGATCAACCCAAGTCATGTGCAGCAGCAGATCCCCCGTGTTGTCTTTATATCTAACTACATGACTTATTGTCTTTATATCTAACTACATGACTTATTCTACTAACTGGACAGAGTCAACCCAGCTTTATATCTAACTACATGACTTATTATACTAACTGGACAGTCAACCCACCTTTATATCTAACTACATGACTTATTCTACTAACTGGACAGAGTCAACCCAGCTTTAACCACTTTCTATTTCACATTCAATATAACCTTTATTTCTACAGTTAAGTCTCTGAGAAAAAAATGTTGCACGAGAGACACTTTTCAAAATCAGGCCTTCAACCACAACACACCgaaggggaaaaaaaacactGTCTGGCAcagacacaaaaaaatacatatactCTAATGGTAATACCCTCAGGGACCATGTGTGTGGGTATTTCACCCTAGCACTATTTTGAGGGTTTCTATAGAAATGTGAACAACAAACAGCTCTCCAAACAGTAGTTGAGGCCTGTGTTGAGGCCATGACACATCAAGGTATAATAGCAACCACATGCCAGACACTCTCCCATCATTCAGGTTAAGTTCCCTTGCAGCTTCTTCATGATAAGGCTATCGGGAGGTGCGTTGGTGAAAACTGTCCCCACAAAAACATGTGTTCCCCACAAGGTGTGGCGGATGACTTTGCAGCAGCCCAGGTCCTCGATGCTGAAGCCCAGGTTACAGTACCGCTCGTCGGTCTCAAACAGTGTGTTGTTG

Function

NR:

description
methylmalonic aciduria and homocystinuria type D protein, mitochondrial-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2070932 True 1056 lncRNA 0.42 2 40757108 40758215

Neighbor

gene id symbol gene type direction distance location
LOC110501875 LOC106582404 coding downstream 72564 40675303 ~ 40684544 (-)
LOC110501872 LOC106582401 coding downstream 262334 40451597 ~ 40494774 (-)
LOC118943637 NA coding downstream 472266 40283405 ~ 40284842 (-)
LOC110501866 LOC106582396 coding downstream 586967 40084457 ~ 40170141 (-)
LOC110501865 LOC106582395 coding downstream 729955 39960431 ~ 40027153 (-)
LOC110501878 LOC106582406 coding upstream 16993 40736648 ~ 40813437 (-)
LOC110501879 LOC106586322 coding upstream 76961 40835176 ~ 40882242 (-)
LOC110502149 LOC106586321 coding upstream 125381 40883596 ~ 40929237 (-)
LOC110501881 LOC106582412 coding upstream 172044 40930259 ~ 40941980 (-)
LOC110501882 LOC106582411 coding upstream 184189 40942404 ~ 40988211 (-)
G1810061 NA non-coding downstream 29188 40672439 ~ 40727920 (-)
G1810091 NA non-coding downstream 32871 40723796 ~ 40724237 (-)
G1809949 NA non-coding downstream 95277 40661625 ~ 40661831 (-)
G1809922 NA non-coding downstream 120728 40636177 ~ 40636380 (-)
G1809848 NA non-coding downstream 186741 40569839 ~ 40570367 (-)
G1810331 NA non-coding upstream 83589 40841804 ~ 40842020 (-)
G1810332 NA non-coding upstream 84613 40842828 ~ 40844532 (-)
G1810337 NA non-coding upstream 91589 40849804 ~ 40850003 (-)
G1810350 NA non-coding upstream 108805 40867020 ~ 40867225 (-)
G1808299 NA other downstream 1812578 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 2144821 38520872 ~ 38726596 (-)
G1807731 NA other downstream 2543921 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 2562012 38193422 ~ 38195096 (-)
G1807020 LOC105030512 other downstream 2996860 37759971 ~ 37760248 (-)
LOC110501886 rhg15 other upstream 689684 41447899 ~ 41523764 (-)
G1811042 NA other upstream 846759 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 1628607 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 1846488 42603998 ~ 42605768 (-)
G1812404 NA other upstream 1919042 42677257 ~ 42677760 (-)

Expression


Co-expression Network