G1810503


Basic Information

Item Value
gene id G1810503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 41140688 ~ 41141172 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2071368
gaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaagtagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaacaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2071368 True 485 lncRNA 0.43 1 41140688 41141172

Neighbor

gene id symbol gene type direction distance location
LOC110501883 LOC106582410 coding downstream 89201 40992915 ~ 41051487 (-)
LOC110501882 LOC106582411 coding downstream 152477 40942404 ~ 40988211 (-)
LOC110501881 LOC106582412 coding downstream 198708 40930259 ~ 40941980 (-)
LOC110502149 LOC106586321 coding downstream 211451 40883596 ~ 40929237 (-)
LOC110501879 LOC106586322 coding downstream 258446 40835176 ~ 40882242 (-)
LOC118943638 NA coding upstream 298776 41439948 ~ 41447272 (-)
LOC110501886 rhg15 coding upstream 306727 41447899 ~ 41523764 (-)
LOC110502151 arl4c coding upstream 471390 41612562 ~ 41613136 (-)
LOC110501887 LOC106582419 coding upstream 481649 41622821 ~ 41624796 (-)
LOC110501888 LOC106582420 coding upstream 527724 41668896 ~ 41743824 (-)
G1810491 NA non-coding downstream 7296 41133102 ~ 41133392 (-)
G1810480 NA non-coding downstream 16819 41123562 ~ 41123869 (-)
G1810401 NA non-coding downstream 126218 41001310 ~ 41014470 (-)
G1810408 NA non-coding downstream 131563 41008760 ~ 41009125 (-)
G1810533 NA non-coding upstream 27100 41168272 ~ 41168475 (-)
G1810552 NA non-coding upstream 46804 41187976 ~ 41188573 (-)
G1810566 NA non-coding upstream 54917 41196089 ~ 41196422 (-)
G1810571 NA non-coding upstream 62746 41203918 ~ 41204241 (-)
G1810789 NA non-coding upstream 68955 41210127 ~ 41210336 (-)
LOC110501878 LOC106582406 other downstream 327301 40736648 ~ 40813437 (-)
G1808299 NA other downstream 2196158 38944136 ~ 38944530 (-)
LOC110502145 LOC106586333 other downstream 2528401 38520872 ~ 38726596 (-)
G1807731 NA other downstream 2927501 38208790 ~ 38241273 (-)
G1807750 LOC106582372 other downstream 2945592 38193422 ~ 38195096 (-)
G1811042 NA other upstream 463802 41604974 ~ 41605231 (-)
G1812079 LOC106582433 other upstream 1245650 42386822 ~ 42389273 (-)
LOC110502155 psd12 other upstream 1463531 42603998 ~ 42605768 (-)
G1812404 NA other upstream 1536085 42677257 ~ 42677760 (-)

Expression


Co-expression Network