G1811532


Basic Information

Item Value
gene id G1811532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 41990028 ~ 41990631 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2072472
tgtttttactactatagtgtgagtgaccaactatatgtttttactactatagtgtgagtgtgacccactagACGTTTTTACAAttatagtgtgagtgtgacccactatttgtttttactactatagtgtgagtgtgacccactatatgtttttactactatagtgtgagtgaccaactatatgtttttacaactatagtgtgagtgacccactatatgattttactactatagtgtgagtgtgacccactatatatttttactactatagtgtgagtgacccactatatgtttttactactatagtgtgagtgacccactatatgtttttactactatagtgtgagtgacccactatatgtttttactactatagtgtgagtgtgtgtgtgagtgacccCCCCTtgattttacactgctgctactcgctgtttattatctatgcatagtcactttatccctacctacatgtacaaattaccttgactaacctgtacacaCGCACATtgacctgtatatagcctttttttattgtgttactttatttGTTCTAATATTTTCTTAAGTCTATTGCTTGAACtgcgctgttggttaagggcttgtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2072472 True 604 lncRNA 0.35 1 41990028 41990631

Neighbor

gene id symbol gene type direction distance location
LOC110502132 clm8 coding upstream 46803 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 461892 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 626902 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 1231802 40745882 ~ 40758226 (+)
LOC110501874 LOC106582403 coding upstream 1431279 40550073 ~ 40558749 (+)
LOC110501889 LOC106582433 coding downstream 265786 42256417 ~ 42389468 (+)
LOC110501894 glpc coding downstream 521342 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 624547 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 697584 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 894080 42884711 ~ 43039681 (+)
G1811516 NA non-coding upstream 19754 41967306 ~ 41970274 (+)
G1811331 NA non-coding upstream 125454 41863711 ~ 41864574 (+)
G1811303 NA non-coding upstream 170625 41819199 ~ 41819403 (+)
G1811301 NA non-coding upstream 172682 41817037 ~ 41817346 (+)
G1811299 LOC106582422 non-coding upstream 176770 41812032 ~ 41813258 (+)
G1811696 NA non-coding downstream 129823 42120454 ~ 42120875 (+)
G1811709 NA non-coding downstream 141439 42132070 ~ 42132269 (+)
G1811717 NA non-coding downstream 145954 42136585 ~ 42136947 (+)
G1811749 NA non-coding downstream 165991 42156622 ~ 42156967 (+)
G1811873 NA non-coding downstream 251451 42242082 ~ 42242419 (+)
G1810740 NA other upstream 523679 41464478 ~ 41466349 (+)
G1810553 NA other upstream 797536 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2064633 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2295160 39693913 ~ 39694868 (+)
G1808209 NA other upstream 2838695 39149080 ~ 39151333 (+)
G1812428 NA other downstream 733041 42723672 ~ 42724114 (+)
G1812953 NA other downstream 1159131 43149762 ~ 43150384 (+)
G1813442 NA other downstream 2117613 44108244 ~ 44110867 (+)

Expression


Co-expression Network