G1812143


Basic Information

Item Value
gene id G1812143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42457229 ~ 42457484 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073106
cttatgggtcagaatataatgatgtaattacgtggggatgaTCTCCGAGGATTCTCTGCGTGGGCCTTCAGCTGTTCGATGGCGCACTACTCCGGCGCACCTCTCTGAGCGTCctcccgatgtcagtgtcctttttggcttaggagtctgttccctcacccaTTGCTCTCGAATGGGGTcctctgaggacagacagctctgtagctcagagctcacagcataggaatgaaaccctttagataccacgattcgatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073106 True 256 lncRNA 0.52 1 42457229 42457484

Neighbor

gene id symbol gene type direction distance location
LOC110501889 LOC106582433 coding upstream 67761 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 514004 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 929093 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1094103 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 1699003 40745882 ~ 40758226 (+)
LOC110501894 glpc coding downstream 54489 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 157694 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 230731 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 427227 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 756356 43213840 ~ 43226393 (+)
G1812141 NA non-coding upstream 788 42456220 ~ 42456441 (+)
G1812138 NA non-coding upstream 1885 42455087 ~ 42455344 (+)
G1812137 NA non-coding upstream 2362 42454598 ~ 42454867 (+)
G1812128 NA non-coding upstream 10654 42446247 ~ 42446575 (+)
G1812126 NA non-coding upstream 11531 42445467 ~ 42445698 (+)
G1812148 NA non-coding downstream 3337 42460821 ~ 42461065 (+)
G1812150 NA non-coding downstream 3630 42461114 ~ 42461346 (+)
G1812158 NA non-coding downstream 7896 42465380 ~ 42465699 (+)
G1812159 NA non-coding downstream 20645 42478129 ~ 42478437 (+)
G1812167 NA non-coding downstream 21383 42478867 ~ 42479307 (+)
G1810740 NA other upstream 990880 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1264737 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2531834 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2762361 39693913 ~ 39694868 (+)
G1812428 NA other downstream 266188 42723672 ~ 42724114 (+)
G1812953 NA other downstream 692278 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1650760 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1860674 44148629 ~ 44324651 (+)

Expression


Co-expression Network