Gene
RNA
| Item | Value |
|---|---|
| gene id | G1812276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 42476287 ~ 42476669 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2073253 | True | 383 | lncRNA | 0.53 | 1 | 42476287 | 42476669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502152 | LOC106582422 | coding | downstream | 576547 | 41798454 ~ 41899740 (-) |
| LOC110502131 | LOC106582415 | coding | downstream | 709109 | 41764963 ~ 41767178 (-) |
| LOC110501888 | LOC106582420 | coding | downstream | 732463 | 41668896 ~ 41743824 (-) |
| LOC110501887 | LOC106582419 | coding | downstream | 851491 | 41622821 ~ 41624796 (-) |
| LOC110502151 | arl4c | coding | downstream | 863151 | 41612562 ~ 41613136 (-) |
| LOC110501896 | LOC106582434 | coding | upstream | 115549 | 42592218 ~ 42603449 (-) |
| LOC110502155 | psd12 | coding | upstream | 127329 | 42603998 ~ 42605768 (-) |
| LOC110501897 | LOC106582436 | coding | upstream | 263950 | 42740619 ~ 42748577 (-) |
| LOC110501898 | LOC106582438 | coding | upstream | 293584 | 42770253 ~ 42797492 (-) |
| LOC110501899 | LOC106582439 | coding | upstream | 324351 | 42801020 ~ 42823612 (-) |
| G1812269 | NA | non-coding | downstream | 8871 | 42467193 ~ 42467416 (-) |
| G1812149 | NA | non-coding | downstream | 15211 | 42460805 ~ 42461076 (-) |
| G1812140 | NA | non-coding | downstream | 20370 | 42455565 ~ 42455917 (-) |
| G1812120 | NA | non-coding | downstream | 38342 | 42437728 ~ 42437945 (-) |
| G1812115 | NA | non-coding | downstream | 42743 | 42433335 ~ 42433544 (-) |
| G1812279 | NA | non-coding | upstream | 3578 | 42480247 ~ 42480462 (-) |
| G1812334 | NA | non-coding | upstream | 91548 | 42568217 ~ 42571855 (-) |
| G1812340 | NA | non-coding | upstream | 106398 | 42583067 ~ 42583436 (-) |
| G1812344 | NA | non-coding | upstream | 111634 | 42588303 ~ 42588555 (-) |
| G1812346 | NA | non-coding | upstream | 112698 | 42589367 ~ 42591134 (-) |
| G1812079 | LOC106582433 | other | downstream | 87014 | 42386822 ~ 42389273 (-) |
| G1811042 | NA | other | downstream | 871056 | 41604974 ~ 41605231 (-) |
| LOC110501886 | rhg15 | other | downstream | 1010640 | 41447899 ~ 41523764 (-) |
| LOC110501878 | LOC106582406 | other | downstream | 1662900 | 40736648 ~ 40813437 (-) |
| G1808299 | NA | other | downstream | 3531757 | 38944136 ~ 38944530 (-) |
| G1812404 | NA | other | upstream | 200588 | 42677257 ~ 42677760 (-) |
| LOC110502171 | LOC106582464 | other | upstream | 2033738 | 44473683 ~ 44553607 (-) |
| G1814480 | NA | other | upstream | 2196778 | 44673447 ~ 44673888 (-) |
| G1815615 | LOC106582489 | other | upstream | 3362081 | 45838750 ~ 45840982 (-) |
