G1812177


Basic Information

Item Value
gene id G1812177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42493682 ~ 42493916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073140
CTTCCAACCTATAAATCCTTCCATCCTTCAACCATTCCAACCCGTCTATCCTACAACCCTTCCAACCATTACAACCCTTCCAAACCGCTAACCCTTCCAACCCATCCTATCCTTCAAGCCTTTCATACCTTCCAATCCTTCCAATTCGTCCATCATTCATCATTCCAACCCTTCAAATTTTCCTACCATTCCAACCGTTAAAACTTTCCAACCCTTCAACCATTCCAACCCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073140 True 235 lncRNA 0.44 1 42493682 42493916

Neighbor

gene id symbol gene type direction distance location
LOC110501889 LOC106582433 coding upstream 104214 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 550457 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 965546 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1130556 41286486 ~ 41363126 (+)
LOC110501877 LOC106582405 coding upstream 1735456 40745882 ~ 40758226 (+)
LOC110501894 glpc coding downstream 18057 42511973 ~ 42550970 (+)
LOC110502156 ahr2a coding downstream 121262 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 194299 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 390795 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 719924 43213840 ~ 43226393 (+)
G1812167 NA non-coding upstream 14375 42478867 ~ 42479307 (+)
G1812159 NA non-coding upstream 15245 42478129 ~ 42478437 (+)
G1812158 NA non-coding upstream 27983 42465380 ~ 42465699 (+)
G1812150 NA non-coding upstream 32336 42461114 ~ 42461346 (+)
G1812148 NA non-coding upstream 32617 42460821 ~ 42461065 (+)
G1812227 NA non-coding downstream 76093 42570009 ~ 42572303 (+)
G1812228 NA non-coding downstream 78912 42572828 ~ 42573035 (+)
G1812233 NA non-coding downstream 86008 42579924 ~ 42580254 (+)
G1812243 NA non-coding downstream 97923 42591839 ~ 42592110 (+)
G1812242 NA non-coding downstream 108181 42602097 ~ 42603430 (+)
G1810740 NA other upstream 1027333 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1301190 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2568287 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2798814 39693913 ~ 39694868 (+)
G1812428 NA other downstream 229756 42723672 ~ 42724114 (+)
G1812953 NA other downstream 655846 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1614328 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1824242 44148629 ~ 44324651 (+)

Expression


Co-expression Network