G1812228


Basic Information

Item Value
gene id G1812228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42572828 ~ 42573035 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073193
CAttaagagagggaggtagagagagaacattttgTAAACTGCTTACATGGCTTTTTTTGTTCTATCTATACCAGGGACATATTGGAGAGGAAATTATTTTTTGAAATGACATCTACTTCCCCAGGCCACCTTCAAAGGCAATGAGATGCCACATTGTTGTATCTGAAAGGATGTCTTCATTACTGCTCTGGATTCAAGTCTCTGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073193 True 208 lncRNA 0.39 1 42572828 42573035

Neighbor

gene id symbol gene type direction distance location
LOC110501894 glpc coding upstream 21858 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 183360 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 629603 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 1044692 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1209702 41286486 ~ 41363126 (+)
LOC110502156 ahr2a coding downstream 42143 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 115180 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 311676 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 640805 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 657389 43230424 ~ 43232133 (+)
G1812227 NA non-coding upstream 525 42570009 ~ 42572303 (+)
G1812177 NA non-coding upstream 78912 42493682 ~ 42493916 (+)
G1812167 NA non-coding upstream 93521 42478867 ~ 42479307 (+)
G1812159 NA non-coding upstream 94391 42478129 ~ 42478437 (+)
G1812158 NA non-coding upstream 107129 42465380 ~ 42465699 (+)
G1812233 NA non-coding downstream 6889 42579924 ~ 42580254 (+)
G1812243 NA non-coding downstream 18804 42591839 ~ 42592110 (+)
G1812242 NA non-coding downstream 29062 42602097 ~ 42603430 (+)
G1812247 psd12 non-coding downstream 31504 42604539 ~ 42605896 (+)
G1812261 NA non-coding downstream 94574 42667609 ~ 42667876 (+)
G1810740 NA other upstream 1106479 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1380336 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2647433 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2877960 39693913 ~ 39694868 (+)
G1812428 NA other downstream 150637 42723672 ~ 42724114 (+)
G1812953 NA other downstream 576727 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1535209 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1745123 44148629 ~ 44324651 (+)

Expression


Co-expression Network