G1812242


Basic Information

Item Value
gene id G1812242
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42602097 ~ 42603430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073209
CCCCAATAGCCTAACACAATCTTGCTGTCATTTTTTTGTGTGATATGTGAGCGCATTCCTTAGCCAACCAGCCATACCTGTGGTGAGCAGGTGTTCCATGGCGTCTGACCACTGCAGGAGCCTCATGAGGTACATCCATGCCTGCAGCCGGTAGGAGTTCCCGTCAGCAGCCTTGGGGTCTCTGTAGAACTTCTCCAGGCTGCAGTTACCATTAAAGGCGGTTGGCAGAGGCACCTTCTCCGCTGTCATCTTGTCCAAGTAGTGCGTGTCAGGCATGGAGATTATCTTGCTGTTCTCCTTGAACCTTGGAGTAGTCCTCTCGCCCAGTGCATATGCCCACCAACCGTACCGCAGGTTCCTTACTGAGCTTGTGTGAATACCAGCCGTCCGAATAGTTGCCCCTATTTTGAACACGGCTATCCCCGAGGGGAGGACCAACTGGAGCACCCGTACCGCCATGGTTATTTACCACCAGAACCACAAATCGTCTCCAAAATCGCTCTATTTGATAGTCCTTCGAGGCGCGACAATAACGCGTCGGGAGTATTTTGTGTGTGCCCGTAGTCGCGTAACATTGACGTTttcggtgggtgtgtgtgtga

Function

NR:

description
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073209 True 602 lncRNA 0.52 3 42602097 42603430

Neighbor

gene id symbol gene type direction distance location
LOC110501894 glpc coding upstream 51127 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 212629 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 658872 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 1073961 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1238971 41286486 ~ 41363126 (+)
LOC110502156 ahr2a coding downstream 11748 42615178 ~ 42685108 (+)
LOC110502157 LOC106582435 coding downstream 84785 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 281281 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 610410 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 626994 43230424 ~ 43232133 (+)
G1812243 NA non-coding upstream 9987 42591839 ~ 42592110 (+)
G1812233 NA non-coding upstream 21843 42579924 ~ 42580254 (+)
G1812228 NA non-coding upstream 29062 42572828 ~ 42573035 (+)
G1812227 NA non-coding upstream 29794 42570009 ~ 42572303 (+)
G1812177 NA non-coding upstream 108181 42493682 ~ 42493916 (+)
G1812247 psd12 non-coding downstream 1109 42604539 ~ 42605896 (+)
G1812261 NA non-coding downstream 64179 42667609 ~ 42667876 (+)
G1812414 NA non-coding downstream 90748 42694178 ~ 42694638 (+)
G1812415 NA non-coding downstream 92830 42696260 ~ 42696694 (+)
G1810740 NA other upstream 1135748 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1409605 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2676702 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2907229 39693913 ~ 39694868 (+)
G1812428 NA other downstream 120242 42723672 ~ 42724114 (+)
G1812953 NA other downstream 546332 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1504814 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1714728 44148629 ~ 44324651 (+)

Expression


Co-expression Network