G1812261


Basic Information

Item Value
gene id G1812261
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42667609 ~ 42667876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073236
cagatttcagctaactggatttgggagaaggagaaattgggaaggcttgggcgagttgctgtggggggtgcagtgctgttgaccgggtaggggtagccaggtggaaagcatggccagccgtagacaaatgcttattgaaattctcaattatagtggatttatcggtggtgaaagtgtttcctatcctcagtgcagtgggcagttcggaggaggtgttcttattatccatggactttacagtgtcccagaactttgtgttgcaggaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073236 True 268 lncRNA 0.49 1 42667609 42667876

Neighbor

gene id symbol gene type direction distance location
LOC110501894 glpc coding upstream 116639 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 278141 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 724384 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 1139473 41526982 ~ 41528136 (+)
LOC110501885 LOC106582417 coding upstream 1304483 41286486 ~ 41363126 (+)
LOC110502157 LOC106582435 coding downstream 20339 42688215 ~ 42735867 (+)
LOC110501901 LOC106582440 coding downstream 216835 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 545964 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 562548 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 678927 43346803 ~ 43486763 (+)
G1812247 psd12 non-coding upstream 61713 42604539 ~ 42605896 (+)
G1812242 NA non-coding upstream 64179 42602097 ~ 42603430 (+)
G1812243 NA non-coding upstream 75499 42591839 ~ 42592110 (+)
G1812233 NA non-coding upstream 87355 42579924 ~ 42580254 (+)
G1812228 NA non-coding upstream 94574 42572828 ~ 42573035 (+)
LOC110502156 ahr2a non-coding downstream 15506 42615178 ~ 42685108 (+)
G1812414 NA non-coding downstream 26302 42694178 ~ 42694638 (+)
G1812415 NA non-coding downstream 28384 42696260 ~ 42696694 (+)
G1812422 NA non-coding downstream 43006 42710882 ~ 42711142 (+)
G1812423 NA non-coding downstream 46311 42714187 ~ 42714426 (+)
G1810740 NA other upstream 1201260 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1475117 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2742214 39924414 ~ 39925395 (+)
G1808787 NA other upstream 2972741 39693913 ~ 39694868 (+)
G1812428 NA other downstream 55796 42723672 ~ 42724114 (+)
G1812953 NA other downstream 481886 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1440368 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1650282 44148629 ~ 44324651 (+)

Expression


Co-expression Network