G1812500


Basic Information

Item Value
gene id G1812500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42702730 ~ 42703286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073547
CTATATTATCTGTATATtgaccaatgatatcaggccataGCCGGCCATGATTATGAACACCTATCAAAACCTATAGTGCAGTGTATtcaaaccctgatgaagacaactTGCTGTCGAAACGGTGGAAAATACATAATTGCATCGGAACAATTATTATGAGGTGTTTCCTTTTCATTTAAAGTACAGCTACAGTTGAACAGGTCATGACAGCTATAGATGAACAGGTCAGGACAGTTATAGATGAACAGGGCAGGACAGCTATAGATGAACAGGTCAGGACAGCTACAGATGAACAGGTCAGGACAGCTacagATGAACAGGTCAGGACAGCTATAGATGAACAGGCCAGGACAGCTATAGATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAAAGTGGGGGGAC
>TU2073548
CTATATTATCTGTATATtgaccaatgatatcaggccataGCCGGCCATGATTATGAACACCTATCAAAACCTATAGTGCAGTGTATtcaaaccctgatgaagacaactTGCTGTCGAAACGGTGGAAAATACATAATTGCATCGGAACAATTATTATGAGGTGTTTCCTTTTCATTTAAAGTACAGCTACAGTTGAACAGGTCATGACAGCTATAGATGAACAGGTCAGGACAGTTATAGATGAACAGGGCAGGACAGCTATAGATGAACAGGTCAGGACAGCTACAGATGAACAGGTCAGGACAGCTacagATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAAAGTGGGGGGAC
>TU2073551
CTATATTATCTGTATATtgaccaatgatatcaggccataGCCGGCCATGATTATGAACACCTATCAAAACCTATAGTGCAGTGTATtcaaaccctgatgaagacaactTGCTGTCGAAACGGTGGAAAATACATAATTGCATCGGAACAATTATTATGAGGTGTTTCCTTTTCATTTAAAGTACAGCTACAGTTGAACAGGTCAGGACAGCTACAGATGAACAGGTCAGGACAGCTacagATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAGCTATAGATGAACAGGTCAGGACAAAGTGGGGGGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073547 False 437 lncRNA 0.43 3 42702730 42703286
TU2073548 False 389 lncRNA 0.42 2 42702730 42703286
TU2073551 True 317 lncRNA 0.42 3 42702730 42703286

Neighbor

gene id symbol gene type direction distance location
LOC110502155 psd12 coding downstream 96962 42603998 ~ 42605768 (-)
LOC110501896 LOC106582434 coding downstream 99281 42592218 ~ 42603449 (-)
LOC110502152 LOC106582422 coding downstream 802990 41798454 ~ 41899740 (-)
LOC110502131 LOC106582415 coding downstream 935552 41764963 ~ 41767178 (-)
LOC110501888 LOC106582420 coding downstream 958906 41668896 ~ 41743824 (-)
LOC110501897 LOC106582436 coding upstream 37333 42740619 ~ 42748577 (-)
LOC110501898 LOC106582438 coding upstream 66967 42770253 ~ 42797492 (-)
LOC110501899 LOC106582439 coding upstream 97734 42801020 ~ 42823612 (-)
LOC110501902 LOC106582441 coding upstream 347118 43050404 ~ 43056474 (-)
LOC110502158 LOC100137092 coding upstream 356263 43059549 ~ 43067135 (-)
G1812495 NA non-coding downstream 6218 42696222 ~ 42696512 (-)
G1812491 NA non-coding downstream 13751 42688210 ~ 42688979 (-)
G1812395 NA non-coding downstream 40800 42661578 ~ 42661930 (-)
G1812352 NA non-coding downstream 94230 42607591 ~ 42608500 (-)
G1812507 NA non-coding upstream 9982 42713268 ~ 42713577 (-)
G1812508 NA non-coding upstream 11900 42715186 ~ 42715554 (-)
G1812509 NA non-coding upstream 15813 42719099 ~ 42719320 (-)
G1812510 NA non-coding upstream 16341 42719627 ~ 42719844 (-)
G1812511 NA non-coding upstream 17001 42720287 ~ 42720518 (-)
G1812404 NA other downstream 24970 42677257 ~ 42677760 (-)
G1812079 LOC106582433 other downstream 313457 42386822 ~ 42389273 (-)
G1811042 NA other downstream 1097499 41604974 ~ 41605231 (-)
LOC110501886 rhg15 other downstream 1237083 41447899 ~ 41523764 (-)
LOC110502171 LOC106582464 other upstream 1807121 44473683 ~ 44553607 (-)
G1814480 NA other upstream 1970161 44673447 ~ 44673888 (-)
G1815615 LOC106582489 other upstream 3135464 45838750 ~ 45840982 (-)
G1816841 NA other upstream 4522265 47225551 ~ 47226646 (-)
G1816929 NA other upstream 4697836 47400985 ~ 47402047 (-)

Expression


Co-expression Network