G1812428


Basic Information

Item Value
gene id G1812428
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 42723672 ~ 42724114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073435
cggctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggtcagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggagaaaaatttcagtctctcgatgtgcaaaactgatagagacataccc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073435 True 443 TUCP 0.44 1 42723672 42724114

Neighbor

gene id symbol gene type direction distance location
LOC110502156 ahr2a coding upstream 38564 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 172702 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 334204 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 780447 41941197 ~ 41943225 (+)
LOC110502150 NA coding upstream 1195536 41526982 ~ 41528136 (+)
LOC110501901 LOC106582440 coding downstream 160597 42884711 ~ 43039681 (+)
LOC110501905 LOC106582444 coding downstream 489726 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 506310 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 622689 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 777679 43501793 ~ 43549935 (+)
G1812425 NA non-coding upstream 2244 42720836 ~ 42721428 (+)
G1812424 NA non-coding upstream 8361 42715086 ~ 42715311 (+)
G1812423 NA non-coding upstream 9246 42714187 ~ 42714426 (+)
G1812422 NA non-coding upstream 12530 42710882 ~ 42711142 (+)
G1812415 NA non-coding upstream 26978 42696260 ~ 42696694 (+)
G1812429 NA non-coding downstream 1706 42725820 ~ 42726072 (+)
G1812411 NA non-coding downstream 13692 42737806 ~ 42739140 (+)
G1812430 NA non-coding downstream 24814 42748928 ~ 42749262 (+)
G1812431 LOC106613263 non-coding downstream 25165 42749279 ~ 42749731 (+)
G1812444 NA non-coding downstream 61630 42785744 ~ 42786135 (+)
G1810740 NA other upstream 1257323 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1531180 41189689 ~ 41192492 (+)
G1809107 NA other upstream 2798277 39924414 ~ 39925395 (+)
G1808787 NA other upstream 3028804 39693913 ~ 39694868 (+)
LOC110502157 LOC106582435 other downstream 5487 42688215 ~ 42735867 (+)
G1812953 NA other downstream 425648 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1384130 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1594044 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1638547 44362661 ~ 44371923 (+)

Expression


Co-expression Network