G1812696


Basic Information

Item Value
gene id G1812696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43024272 ~ 43024528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073759
aggggatgtaaagccataacacatatgtttttctagcagcagattatgatcaataatgtcaaaagctgcactgaactCTAACAAAACAATCTTTTTATTATTTACCTCAGCCAATTATCAGCCATTTGTGTAAGTGGTTACATCTTAaatgcccttccctataagcatgctgaaaatcTTTTGTTAATtggtttactgtgaaatagcattgtatctggtcaaacacaaaaGTTTACTTTTTTTacaagggttggtaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073759 True 257 lncRNA 0.33 1 43024272 43024528

Neighbor

gene id symbol gene type direction distance location
LOC110502157 LOC106582435 coding upstream 289710 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 339164 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 473302 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 634804 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 1081047 41941197 ~ 41943225 (+)
LOC110501905 LOC106582444 coding downstream 189312 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 205896 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 322275 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 477265 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 525944 43550472 ~ 43572947 (+)
G1812679 NA non-coding upstream 23600 43000451 ~ 43000672 (+)
G1812672 NA non-coding upstream 34153 42989911 ~ 42990119 (+)
G1812658 NA non-coding upstream 49298 42974749 ~ 42974974 (+)
G1812557 NA non-coding upstream 171591 42852461 ~ 42852681 (+)
G1812556 NA non-coding upstream 172439 42851609 ~ 42851833 (+)
G1812704 NA non-coding downstream 9906 43034434 ~ 43034692 (+)
G1812706 NA non-coding downstream 11477 43036005 ~ 43036219 (+)
G1812806 NA non-coding downstream 15533 43040061 ~ 43040266 (+)
G1812807 NA non-coding downstream 15829 43040357 ~ 43041904 (+)
G1812871 NA non-coding downstream 67550 43092078 ~ 43092288 (+)
G1812428 NA other upstream 300158 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1557923 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1831780 41189689 ~ 41192492 (+)
G1812953 NA other downstream 125234 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1083716 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1293630 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1338133 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1473929 44498457 ~ 44508051 (+)

Expression


Co-expression Network