G1812706


Basic Information

Item Value
gene id G1812706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43036005 ~ 43036219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073769
ggtattgtttgtaaattgatgaggaaaaacattaaattaatccattttagaataaggctgtaacctaacaaaatgtggaaaaagtcaaggggtctgaatactttctgaatgcactgtgtatatacagtaccagtcaaaagtttggacacaccgactcattcaagggttcttctaTATTTTGCACATTTctacataaaaactatgaaataacacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073769 True 215 lncRNA 0.32 1 43036005 43036219

Neighbor

gene id symbol gene type direction distance location
LOC110502157 LOC106582435 coding upstream 301443 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 350897 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 485035 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 646537 42256417 ~ 42389468 (+)
LOC110502132 clm8 coding upstream 1092780 41941197 ~ 41943225 (+)
LOC110501905 LOC106582444 coding downstream 177621 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 194205 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 310584 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 465574 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 514253 43550472 ~ 43572947 (+)
G1812704 NA non-coding upstream 1313 43034434 ~ 43034692 (+)
G1812696 NA non-coding upstream 11477 43024272 ~ 43024528 (+)
G1812679 NA non-coding upstream 35333 43000451 ~ 43000672 (+)
G1812672 NA non-coding upstream 45886 42989911 ~ 42990119 (+)
G1812658 NA non-coding upstream 61031 42974749 ~ 42974974 (+)
G1812806 NA non-coding downstream 3842 43040061 ~ 43040266 (+)
G1812807 NA non-coding downstream 4138 43040357 ~ 43041904 (+)
G1812871 NA non-coding downstream 55859 43092078 ~ 43092288 (+)
G1812872 NA non-coding downstream 56282 43092501 ~ 43092707 (+)
G1812882 NA non-coding downstream 61722 43097941 ~ 43098160 (+)
G1812428 NA other upstream 311891 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1569656 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1843513 41189689 ~ 41192492 (+)
G1812953 NA other downstream 113543 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1072025 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1281939 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1326442 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1462238 44498457 ~ 44508051 (+)

Expression


Co-expression Network