G1812871


Basic Information

Item Value
gene id G1812871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43092078 ~ 43092288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073950
GTTATAagatggattggaccaaggtgcagcgtggtaggcgtaaatttttattttatttaaatgacaccgaaaaaacaacaaaatacaaaaacgaacgtaaagctacatgcagtgcagaaagcaactacacacaaacaagatcccacaaactaaaggtggaaaaaaggctgcctaagtatgagacaacgatagacagcctcctctgattggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073950 True 211 lncRNA 0.39 1 43092078 43092288

Neighbor

gene id symbol gene type direction distance location
LOC110501901 LOC106582440 coding upstream 54084 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 357516 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 406970 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 541108 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 702610 42256417 ~ 42389468 (+)
LOC110501905 LOC106582444 coding downstream 121552 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 138136 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 254515 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 409505 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 458184 43550472 ~ 43572947 (+)
G1812807 NA non-coding upstream 50174 43040357 ~ 43041904 (+)
G1812806 NA non-coding upstream 51812 43040061 ~ 43040266 (+)
G1812706 NA non-coding upstream 55859 43036005 ~ 43036219 (+)
G1812704 NA non-coding upstream 57386 43034434 ~ 43034692 (+)
G1812696 NA non-coding upstream 67550 43024272 ~ 43024528 (+)
G1812872 NA non-coding downstream 213 43092501 ~ 43092707 (+)
G1812882 NA non-coding downstream 5653 43097941 ~ 43098160 (+)
G1812895 NA non-coding downstream 16228 43108516 ~ 43108780 (+)
G1812896 NA non-coding downstream 16512 43108800 ~ 43109115 (+)
G1812915 NA non-coding downstream 29718 43122006 ~ 43122234 (+)
G1812428 NA other upstream 367964 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1625729 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1899586 41189689 ~ 41192492 (+)
G1812953 NA other downstream 57474 43149762 ~ 43150384 (+)
G1813442 NA other downstream 1015956 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1225870 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1270373 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1406169 44498457 ~ 44508051 (+)

Expression


Co-expression Network