G1812896


Basic Information

Item Value
gene id G1812896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43108800 ~ 43109115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2073984
aaggagaggcggaccaaaatgcagcgtgattTCTATTCATGATTCTTTAATGAAGACTCTATACATGAAcagactaacaaaacaagaaatgtgaaaaaccaaaacagcccaatctggtgcaaacacagagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaacatagaaatacccaaatcatagaaaaacaaacatagactgcccaccccaactcacgccctgaccatactaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2073984 True 316 lncRNA 0.41 1 43108800 43109115

Neighbor

gene id symbol gene type direction distance location
LOC110501901 LOC106582440 coding upstream 70806 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 374238 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 423692 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 557830 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 719332 42256417 ~ 42389468 (+)
LOC110501905 LOC106582444 coding downstream 104725 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 121309 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 237688 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 392678 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 441357 43550472 ~ 43572947 (+)
G1812895 NA non-coding upstream 20 43108516 ~ 43108780 (+)
G1812882 NA non-coding upstream 10640 43097941 ~ 43098160 (+)
G1812872 NA non-coding upstream 16093 43092501 ~ 43092707 (+)
G1812871 NA non-coding upstream 16512 43092078 ~ 43092288 (+)
G1812807 NA non-coding upstream 66896 43040357 ~ 43041904 (+)
G1812915 NA non-coding downstream 12891 43122006 ~ 43122234 (+)
G1812930 NA non-coding downstream 26222 43135337 ~ 43135553 (+)
G1813008 NA non-coding downstream 91932 43201047 ~ 43201301 (+)
G1813017 NA non-coding downstream 101012 43210127 ~ 43210763 (+)
G1813071 NA non-coding downstream 175158 43284273 ~ 43291106 (+)
G1812428 NA other upstream 384686 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1642451 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1916308 41189689 ~ 41192492 (+)
G1812953 NA other downstream 40647 43149762 ~ 43150384 (+)
G1813442 NA other downstream 999129 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1209043 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1253546 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1389342 44498457 ~ 44508051 (+)

Expression


Co-expression Network