G1812930


Basic Information

Item Value
gene id G1812930
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43135337 ~ 43135553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074018
GTCCATTGTTCATGTCTCAAACCTGAATTCAGGTCAGGTCTTAAACTCAAAGGAAAAGAGAAACTTTTAAGAAACTCTCCTAAACACATTTGTGTCAATTCTACAAAAAGCACATACAAGACTAGAACACAACAATAAATATATGCGTGAGAATGTGCATGTGTCATAACCCTAAACATAGGTTGTCTGATACTAGATACATTTTGAACTTTGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074018 True 217 lncRNA 0.35 1 43135337 43135553

Neighbor

gene id symbol gene type direction distance location
LOC110501901 LOC106582440 coding upstream 97343 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 400775 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 450229 42615178 ~ 42685108 (+)
LOC110501894 glpc coding upstream 584367 42511973 ~ 42550970 (+)
LOC110501889 LOC106582433 coding upstream 745869 42256417 ~ 42389468 (+)
LOC110501905 LOC106582444 coding downstream 78287 43213840 ~ 43226393 (+)
LOC110501904 LOC106582430 coding downstream 94871 43230424 ~ 43232133 (+)
LOC110501906 LOC106582445 coding downstream 211250 43346803 ~ 43486763 (+)
LOC110501907 LOC106582447 coding downstream 366240 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 414919 43550472 ~ 43572947 (+)
G1812915 NA non-coding upstream 13103 43122006 ~ 43122234 (+)
G1812896 NA non-coding upstream 26222 43108800 ~ 43109115 (+)
G1812895 NA non-coding upstream 26557 43108516 ~ 43108780 (+)
G1812882 NA non-coding upstream 37177 43097941 ~ 43098160 (+)
G1812872 NA non-coding upstream 42630 43092501 ~ 43092707 (+)
G1813008 NA non-coding downstream 65494 43201047 ~ 43201301 (+)
G1813017 NA non-coding downstream 74574 43210127 ~ 43210763 (+)
G1813071 NA non-coding downstream 148720 43284273 ~ 43291106 (+)
G1813123 NA non-coding downstream 222881 43358434 ~ 43359555 (+)
G1813094 NA non-coding downstream 250408 43385961 ~ 43389375 (+)
G1812428 NA other upstream 411223 42723672 ~ 42724114 (+)
G1810740 NA other upstream 1668988 41464478 ~ 41466349 (+)
G1810553 NA other upstream 1942845 41189689 ~ 41192492 (+)
G1812953 NA other downstream 14209 43149762 ~ 43150384 (+)
G1813442 NA other downstream 972691 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 1182605 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1227108 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1362904 44498457 ~ 44508051 (+)

Expression


Co-expression Network